RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PCNTO95613 3336 aa23.03■■□□□ 1.28
YBX3-202ENST00000279550 CLIC2O15247 247 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 NDUFA10O95299 355 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 ABL1P00519 1130 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 NR3C1P04150 777 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 UBA1P22314 1058 aaKnown RBP23.02■■□□□ 1.28
YBX3-202ENST00000279550 ARHGAP25P42331 645 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 KCNV1Q6PIU1 500 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 RDM1Q8NG50 284 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 SEL1LQ9UBV2 794 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 TELO2Q9Y4R8 837 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.02■■□□□ 1.28
YBX3-202ENST00000279550 RARRES1P49788 294 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 RBM10P98175 930 aaKnown RBP23.02■■□□□ 1.28
YBX3-202ENST00000279550 NAA30Q147X3 362 aaPredicted RBP23.02■■□□□ 1.28
YBX3-202ENST00000279550 TSR1Q2NL82 804 aaKnown RBP23.02■■□□□ 1.28
YBX3-202ENST00000279550 CYFIP1Q7L576 1253 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 ZNF720Q7Z2F6 126 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 SMAP1Q8IYB5 467 aaPredicted RBP23.02■■□□□ 1.28
YBX3-202ENST00000279550 ZNF710Q8N1W2 664 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 SH2D3AQ9BRG2 576 aa23.02■■□□□ 1.28
YBX3-202ENST00000279550 TNPO2O14787 897 aaKnown RBP23.01■■□□□ 1.27
YBX3-202ENST00000279550 HOXC6P09630 235 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 CASP4P49662 377 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 ODR4Q5SWX8 454 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 MAEAQ7L5Y9 396 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 SOCS4Q8WXH5 440 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 BAP1Q92560 729 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 USP6NLQ92738 828 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 IQCDQ96DY2 449 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.01■■□□□ 1.27
YBX3-202ENST00000279550 ZNF215Q9UL58 517 aaPredicted RBP23.01■■□□□ 1.27
YBX3-202ENST00000279550 PCDHA10Q9Y5I2 948 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 MCM3APO60318 1980 aa23.01■■□□□ 1.27
YBX3-202ENST00000279550 AKAP3O75969 853 aa23■■□□□ 1.27
YBX3-202ENST00000279550 ARIH2O95376 493 aa23■■□□□ 1.27
YBX3-202ENST00000279550 CTGFP29279 349 aa23■■□□□ 1.27
YBX3-202ENST00000279550 NEDD9Q14511 834 aa23■■□□□ 1.27
YBX3-202ENST00000279550 LY6KQ17RY6 165 aa23■■□□□ 1.27
YBX3-202ENST00000279550 FRMD5Q7Z6J6 570 aa23■■□□□ 1.27
YBX3-202ENST00000279550 FAM178BQ8IXR5 827 aa23■■□□□ 1.27
YBX3-202ENST00000279550 TINF2Q9BSI4 451 aa23■■□□□ 1.27
YBX3-202ENST00000279550 LSM14BQ9BX40 385 aaKnown RBP23■■□□□ 1.27
YBX3-202ENST00000279550 STRA6Q9BX79 667 aa23■■□□□ 1.27
YBX3-202ENST00000279550 VTA1Q9NP79 307 aa23■■□□□ 1.27
YBX3-202ENST00000279550 DDX41Q9UJV9 622 aaKnown RBP23■■□□□ 1.27
YBX3-202ENST00000279550 SYNGAP1Q96PV0 1343 aa23■■□□□ 1.27
YBX3-202ENST00000279550 BACH1O14867 736 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 SORBS3O60504 671 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 USO1O60763 962 aaKnown RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 NOL4O94818 638 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 TBC1D8O95759 1140 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 SNAI1O95863 264 aaPredicted RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 YWHABP31946 246 aaKnown RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 PSMC5P62195 406 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 LACTBP83111 547 aaPredicted RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 APBA1Q02410 837 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 SP4Q02446 784 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 CCDC62Q6P9F0 684 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 GPIHBP1Q8IV16 184 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 C4orf19Q8IY42 314 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 MSL3Q8N5Y2 521 aaKnown RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 LRRN4CLQ8ND94 238 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 ZNF397Q8NF99 534 aaPredicted RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 NEK11Q8NG66 645 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 SCFD2Q8WU76 684 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 CRACR2AQ9BSW2 395 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 CFHR5Q9BXR6 569 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 GJD2Q9UKL4 321 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 MYH11P35749 1972 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 DOCK5Q9H7D0 1870 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 UBE4BO95155 1302 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 PPP1R37O75864 691 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 FARP2O94887 1054 aaPredicted RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 CASQ1P31415 396 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 HNRNPH3P31942 346 aaKnown RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 ACTR2P61160 394 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 UTP14CQ5TAP6 766 aaKnown RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 PLA2G4FQ68DD2 849 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 KATNBL1Q9H079 304 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 PDGFCQ9NRA1 345 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 ZNHIT6Q9NWK9 470 aaKnown RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 ARMCX3Q9UH62 379 aaPredicted RBP22.99■■□□□ 1.27
YBX3-202ENST00000279550 FAM184BQ9ULE4 1060 aa22.99■■□□□ 1.27
YBX3-202ENST00000279550 SLC16A3O15427 465 aaKnown RBP22.98■■□□□ 1.27
YBX3-202ENST00000279550 GGPS1O95749 300 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 PLEKP08567 350 aaPredicted RBP22.98■■□□□ 1.27
YBX3-202ENST00000279550 RGS2P41220 211 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 FCGRTP55899 365 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 CDK17Q00537 523 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 KCNH2Q12809 1159 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 TTLL4Q14679 1199 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 PDXDC1Q6P996 788 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 METTL7BQ6UX53 244 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 NHEJ1Q9H9Q4 299 aaPredicted RBP22.98■■□□□ 1.27
YBX3-202ENST00000279550 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
YBX3-202ENST00000279550 LRRC53A6NM62 1247 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 TRPA1O75762 1119 aa22.97■■□□□ 1.27
YBX3-202ENST00000279550 SLU7O95391 586 aaKnown RBP22.97■■□□□ 1.27
YBX3-202ENST00000279550 PSMC4P43686 418 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms