RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 STYK1Q6J9G0 422 aa12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 PRPF38AQ8NAV1 312 aaKnown RBP12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 MKL1Q969V6 931 aa12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 CELF4Q9BZC1 486 aaKnown RBP12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 TMX2Q9Y320 296 aa12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 MYH10P35580 1976 aa12.88□□□□□ -0.35
SLC13A3-201ENST00000279027 LRRIQ4A6NIV6 560 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 NDUFAB1O14561 156 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 NOL4O94818 638 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 HMGCS2P54868 508 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 CCDC26Q8TAB7 109 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 KCTD10Q9H3F6 313 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 STK24Q9Y6E0 443 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 PITPNM2Q9BZ72 1349 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 GLI1P08151 1106 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 CXCL9Q07325 125 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 BAATQ14032 418 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 EPHA7Q15375 998 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 NAB2Q15742 525 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 C2CD6Q53TS8 623 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 HAUS6Q7Z4H7 955 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 WRNIP1Q96S55 665 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 RPAP3Q9H6T3 665 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 RAB21Q9UL25 225 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 BZW2Q9Y6E2 419 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 GSTTP1A0A1W2PQM5 241 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 PGRMC1O00264 195 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 TBX3O15119 743 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 RAD51CO43502 376 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 CAP2P40123 477 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 SNX1Q13596 522 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 ACCSQ96QU6 501 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 ATP8A1Q9Y2Q0 1164 aa12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 UTP11Q9Y3A2 253 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-201ENST00000279027 CALCAP01258 141 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 KRT71Q3SY84 523 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 SNRNP48Q6IEG0 339 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 MRRFQ96E11 262 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 CAPS2Q9BXY5 557 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 PLCB1Q9NQ66 1216 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 KIF4AO95239 1232 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 P4HBP07237 508 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 IVLP07476 585 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 PLTPP55058 493 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 HDLBPQ00341 1268 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 DMP1Q13316 513 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 NNTQ13423 1086 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 Q4G0T1 1027 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 SWSAP1Q6NVH7 229 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 FOXR1Q6PIV2 292 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 GMCL1P1Q8NEA9 526 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 SLC35C1Q96A29 364 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 ZNRF3Q9ULT6 936 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 GRID2IPA4D2P6 1211 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 FOXN3O00409 490 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 HGSO14964 777 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 POLD1P28340 1107 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 PPFIA1Q13136 1202 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 PPP1R7Q15435 360 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 CBWD6Q4V339 395 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 CBWD3Q5JTY5 395 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 CBWD5Q5RIA9 395 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 TATDN1Q6P1N9 297 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 RPUSD2Q8IZ73 545 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 MICALL1Q8N3F8 863 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 SLC30A5Q8TAD4 765 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 CCDC114Q96M63 670 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 MXRA8Q9BRK3 442 aa12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 NOC2LQ9Y3T9 749 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-201ENST00000279027 DENND3A2RUS2 1198 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 EBAG9O00559 213 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 DAPK3O43293 454 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 FTLP02792 175 aaPredicted RBP12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 YWHABP31946 246 aaKnown RBP12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 NF2P35240 595 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SOX5P35711 763 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 VAMP7P51809 220 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 ANKRD35Q8N283 1001 aa12.85□□□□□ -0.35
SLC13A3-201ENST00000279027 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms