RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ANKRD63C9JTQ0 380 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 STRNO43815 780 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 NR3C1P04150 777 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 PLS3P13797 630 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 MAPK4P31152 587 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 HAUS6Q7Z4H7 955 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 ATRIPQ8WXE1 791 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 CAPNS2Q96L46 248 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 STRA6Q9BX79 667 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 FAM170AA1A519 330 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 LGALS16A8MUM7 142 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 TGFB3P10600 412 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 MUTP22033 750 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 TERF1P54274 439 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 TTLL4Q14679 1199 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 PLCB4Q15147 1175 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 SYCP1Q15431 976 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 XKR3Q5GH77 459 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.356e-7■■■■■ 46.8
SSRP1-201ENST00000278412 ANKEF1Q9NU02 776 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 ODF2LQ9ULJ1 636 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
SSRP1-201ENST00000278412 SKILP12757 684 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
SSRP1-201ENST00000278412 LRRC63Q05C16 580 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 MAP2K5Q13163 448 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 TMEM161BQ8NDZ6 487 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 RDM1Q8NG50 284 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 GTF3C2Q8WUA4 911 aaPredicted RBP12.89□□□□□ -0.35
SSRP1-201ENST00000278412 AGPAT5Q9NUQ2 364 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 MAGEC2Q9UBF1 373 aaPredicted RBP12.89□□□□□ -0.35
SSRP1-201ENST00000278412 CBFA2T2O43439 604 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 GAP43P17677 238 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 FKBP3Q00688 224 aaKnown RBP12.88□□□□□ -0.35
SSRP1-201ENST00000278412 BEX3Q00994 111 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TMEM139Q8IV31 216 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 AGPAT3Q9NRZ7 376 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TRMT1Q9NXH9 659 aaKnown RBP12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TSKSQ9UJT2 592 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 LOXHD1Q8IVV2 1947 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 DENND3A2RUS2 1198 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TRPA1O75762 1119 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TRIM49P0CI25 452 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TRIM49CP0CI26 452 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 GLRA2P23416 452 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 EEF1GP26641 437 aaKnown RBP12.88□□□□□ -0.35
SSRP1-201ENST00000278412 CLCN3P51790 818 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 DLG4P78352 724 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
SSRP1-201ENST00000278412 BMT2Q1RMZ1 405 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 ABRAQ8N0Z2 381 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TRPV1Q8NER1 839 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 ZFYVE28Q9HCC9 887 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 FAM207AQ9NSI2 230 aaPredicted RBP12.88□□□□□ -0.35
SSRP1-201ENST00000278412 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
SSRP1-201ENST00000278412 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
SSRP1-201ENST00000278412 SLC15A5A6NIM6 579 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 DYNC1LI2O43237 492 aaPredicted RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 LGALS2P05162 132 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 ADSSP30520 456 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 PSMC4P43686 418 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TM4SF4P48230 202 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TBC1D8BQ0IIM8 1120 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 SEZ6Q53EL9 994 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 E4F1Q66K89 784 aaPredicted RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 OTUD6AQ7L8S5 288 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 CDR2LQ86X02 465 aaPredicted RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 SYCP3Q8IZU3 236 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 USP6NLQ92738 828 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TSG101Q99816 390 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 ACTN1P12814 892 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TMEM130Q8N3G9 435 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 PLEKHO2Q8TD55 490 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 ZBTB45Q96K62 511 aaPredicted RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 NDST4Q9H3R1 872 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 ATP6V0A4Q9HBG4 840 aa12.87□□□□□ -0.35
SSRP1-201ENST00000278412 TYW1Q9NV66 732 aaKnown RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 LARSQ9P2J5 1176 aaKnown RBP12.87□□□□□ -0.35
SSRP1-201ENST00000278412 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
SSRP1-201ENST00000278412 ELNP15502 786 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 SFPQP23246 707 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSRP1-201ENST00000278412 PRKCZQ05513 592 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
SSRP1-201ENST00000278412 HIC1Q14526 733 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms