RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 HSD17B14Q9BPX1 270 aa15.2■□□□□ 0.02
CT55-201ENST00000276241 C17orf80Q9BSJ5 609 aa15.2■□□□□ 0.02
CT55-201ENST00000276241 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
CT55-201ENST00000276241 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
CT55-201ENST00000276241 LRFN2Q9ULH4 789 aa15.2■□□□□ 0.02
CT55-201ENST00000276241 COL4A6Q14031 1691 aa15.2■□□□□ 0.02
CT55-201ENST00000276241 ADGRA3Q8IWK6 1321 aa15.2■□□□□ 0.02
CT55-201ENST00000276241 EVPLQ92817 2033 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 A0A087WWV3 80 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 A0A087WZ62 844 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 MED24O75448 989 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 CSDE1O75534 798 aaKnown RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 DARSP14868 501 aaKnown RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 EIF4BP23588 611 aaKnown RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 NPAS4Q8IUM7 802 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 KSR1Q8IVT5 923 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 MTRQ99707 1265 aa15.19■□□□□ 0.02
CT55-201ENST00000276241 FDXACB1Q9BRP7 624 aaPredicted RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 GCOM2Q9BZD3 368 aaPredicted RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
CT55-201ENST00000276241 K7ELQ4 463 aaPredicted RBP15.18■□□□□ 0.02
CT55-201ENST00000276241 LYPLA2O95372 231 aa15.18■□□□□ 0.02
CT55-201ENST00000276241 PTGDRQ13258 359 aa15.18■□□□□ 0.02
CT55-201ENST00000276241 CCDC85BQ15834 202 aaPredicted RBP15.18■□□□□ 0.02
CT55-201ENST00000276241 PAN2Q504Q3 1202 aaKnown RBP15.18■□□□□ 0.02
CT55-201ENST00000276241 RILPL1Q5EBL4 403 aa15.18■□□□□ 0.02
CT55-201ENST00000276241 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
CT55-201ENST00000276241 CATSPER3Q86XQ3 398 aa15.18■□□□□ 0.02
CT55-201ENST00000276241 PSPC1Q8WXF1 523 aaKnown RBP15.18■□□□□ 0.02
CT55-201ENST00000276241 PPME1Q9Y570 386 aa15.18■□□□□ 0.02
CT55-201ENST00000276241 COL4A3BPQ9Y5P4 624 aa15.18■□□□□ 0.02
CT55-201ENST00000276241 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 STAG3L1P0CL83 205 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 SPATA31C1P0DKV0 1188 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 SARSP49591 514 aaKnown RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 GATMP50440 423 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
CT55-201ENST00000276241 ERVK-21P61565 698 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 GRB10Q13322 594 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 BTG3Q14201 252 aaPredicted RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 ZNF410Q86VK4 478 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 EXOC8Q8IYI6 725 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 ZNF710Q8N1W2 664 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 FIBCD1Q8N539 461 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 C4orf32Q8N8J7 132 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 RC3H2Q9HBD1 1191 aaKnown RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 ATP6V0A4Q9HBG4 840 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 TUFT1Q9NNX1 390 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 RGS18Q9NS28 235 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 LRWD1Q9UFC0 647 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 GTPBP6O43824 516 aaPredicted RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 GAS2O43903 313 aaKnown RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 DGKIO75912 1065 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 ZSCAN20P17040 1043 aaPredicted RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 SFPQP23246 707 aaKnown RBP eCLIP15.17■□□□□ 0.02
CT55-201ENST00000276241 CCT6AP40227 531 aaKnown RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 RARRES1P49788 294 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 FERMT3Q86UX7 667 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 SNX29Q8TEQ0 813 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 TCP11Q8WWU5 503 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 POLR3CQ9BUI4 534 aaPredicted RBP15.17■□□□□ 0.02
CT55-201ENST00000276241 XPNPEP1Q9NQW7 623 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 ANKEF1Q9NU02 776 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 PCDHB7Q9Y5E2 793 aa15.17■□□□□ 0.02
CT55-201ENST00000276241 CHD9Q3L8U1 2897 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 PP2D1A8MPX8 630 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 C9IYK1 514 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 LAD1O00515 517 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 DGAT1O75907 488 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 SRGAP2CP0DJJ0 459 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 CTNNB1P35222 781 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 CDC42EP1Q00587 391 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 LAMTOR4Q0VGL1 99 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 DSC3Q14574 896 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 SLC24A5Q71RS6 500 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 MAEAQ7L5Y9 396 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 RNF149Q8NC42 400 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 PRPF31Q8WWY3 499 aaKnown RBP15.16■□□□□ 0.02
CT55-201ENST00000276241 ZNF689Q96CS4 500 aaPredicted RBP15.16■□□□□ 0.02
CT55-201ENST00000276241 RAB34Q9BZG1 259 aa15.16■□□□□ 0.02
CT55-201ENST00000276241 PIN4Q9Y237 131 aaKnown RBP15.16■□□□□ 0.02
CT55-201ENST00000276241 PDCP20941 246 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 RPA1P27694 616 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 EPC2Q52LR7 807 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 CATSPER4Q7RTX7 472 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 TMEM192Q8IY95 271 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 INO80BQ9C086 356 aaPredicted RBP15.15■□□□□ 0.02
CT55-201ENST00000276241 POLR3FQ9H1D9 316 aaPredicted RBP15.15■□□□□ 0.02
CT55-201ENST00000276241 MTCH2Q9Y6C9 303 aa15.15■□□□□ 0.02
CT55-201ENST00000276241 NLRC5Q86WI3 1866 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms