RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 IRGQQ8WZA9 623 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 USP26Q9BXU7 913 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 EHD1Q9H4M9 534 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TACC3Q9Y6A5 838 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 YTHDC2Q9H6S0 1430 aaKnown RBP9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 KRT16P08779 473 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 MASP1P48740 699 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 KPNA1P52294 538 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 RPP38P78345 283 aaKnown RBP9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 NIPAL4Q0D2K0 466 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 ACAP2Q15057 778 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 ARSHQ5FYA8 562 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 ZNF600Q6ZNG1 722 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 CTAGE6Q86UF2 777 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 RMDN1Q96DB5 314 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 ARL5BQ96KC2 179 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 EFHD1Q9BUP0 239 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 DNAJC18Q9H819 358 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TRIM45Q9H8W5 580 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 RMND1Q9NWS8 449 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 FBXO10Q9UK96 956 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 VANGL2Q9ULK5 521 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 MAD1L1Q9Y6D9 718 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 RHOBTB1O94844 696 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 HSD3B2P26439 372 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 NR2C2P49116 596 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TRPC3Q13507 836 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TWISTNBQ3B726 338 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TMEM214Q6NUQ4 689 aaKnown RBP9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 ZNF804AQ7Z570 1209 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 RABGGTAQ92696 567 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 MNTQ99583 582 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 SDF4Q9BRK5 362 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 CNPY3Q9BT09 278 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 FANCLQ9NW38 375 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 ZIM2Q9NZV7 527 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 SPATA2Q9UM82 520 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 METP08581 1390 aa9.53□□□□□ -0.88
CTDSPL-201ENST00000273179 TOR1BO14657 336 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 CHGBP05060 677 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 CPA3P15088 417 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 GPC3P51654 580 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 CCR3P51677 355 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 KRT71Q3SY84 523 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 MAP3K21Q5TCX8 1036 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 PGBD1Q96JS3 809 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 CENPKQ9BS16 269 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 TEX12Q9BXU0 123 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 UCKL1Q9NWZ5 548 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 AKAP7Q9P0M2 348 aaPredicted RBP9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 MYPNQ86TC9 1320 aa9.52□□□□□ -0.88
CTDSPL-201ENST00000273179 ZSCAN5BA6NJL1 495 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 PDLIM1O00151 329 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 GSTT2P0CG29 244 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 GSTT2BP0CG30 244 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 IST1P53990 364 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 PTPN5P54829 565 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 C8orf34Q49A92 452 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 CCDC102BQ68D86 513 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 TCF12Q99081 682 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 UBE2OQ9C0C9 1292 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 SLC35C2Q9NQQ7 365 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 BTBD7Q9P203 1132 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 FHOD1Q9Y613 1164 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 SLCO1A2P46721 670 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 ATN1P54259 1190 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 SEC13P55735 322 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 FKBP4Q02790 459 aaKnown RBP eCLIP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 DPYSQ14117 519 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 EFR3AQ14156 821 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 TMC5Q6UXY8 1006 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 HS2ST1Q7LGA3 356 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 NME9Q86XW9 330 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 TCAIMQ8N3R3 496 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 BMP2KQ9NSY1 1161 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 HAUS2Q9NVX0 235 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 DDX25Q9UHL0 483 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 TRAF3IP3Q9Y228 551 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 ZNF335Q9H4Z2 1342 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 DGKIO75912 1065 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 SERPINB3P29508 390 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 FAM83BQ5T0W9 1011 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 STKLD1Q8NE28 680 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 MPHOSPH8Q99549 860 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 MOV10L1Q9BXT6 1211 aaKnown RBP9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 SLC40A1Q9NP59 571 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 FADS3Q9Y5Q0 445 aa9.52□□□□□ -0.89
CTDSPL-201ENST00000273179 SYNJ2BP-COX16A0A087WUM0 186 aa9.51□□□□□ -0.89
CTDSPL-201ENST00000273179 CDC45O75419 566 aa9.51□□□□□ -0.89
CTDSPL-201ENST00000273179 PCP4P48539 62 aa9.51□□□□□ -0.89
CTDSPL-201ENST00000273179 GNGT1P63211 74 aa9.51□□□□□ -0.89
CTDSPL-201ENST00000273179 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
CTDSPL-201ENST00000273179 OSTM1Q86WC4 334 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms