RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 ZNF211Q13398 564 aaPredicted RBP11.72□□□□□ -0.53
CNGA3-201ENST00000272602 CRY2Q49AN0 593 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
CNGA3-201ENST00000272602 STYK1Q6J9G0 422 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 ACER1Q8TDN7 264 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 GJA10Q969M2 543 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 IFT74Q96LB3 600 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
CNGA3-201ENST00000272602 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 LRRC4CQ9HCJ2 640 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 PICK1Q9NRD5 415 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 FGFR1OP2Q9NVK5 253 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.72□□□□□ -0.53
CNGA3-201ENST00000272602 TRIM33Q9UPN9 1127 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 C5P01031 1676 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 A0A1W2PQJ5 194 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 LGR5O75473 907 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 HOXA13P31271 388 aaPredicted RBP11.72□□□□□ -0.53
CNGA3-201ENST00000272602 CDK17Q00537 523 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 NAB2Q15742 525 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 IFI16Q16666 785 aaKnown RBP11.72□□□□□ -0.53
CNGA3-201ENST00000272602 VSIG1Q86XK7 387 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 FBF1Q8TES7 1133 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 ZMYND12Q9H0C1 365 aa11.72□□□□□ -0.53
CNGA3-201ENST00000272602 NQO1P15559 274 aaKnown RBP11.71□□□□□ -0.53
CNGA3-201ENST00000272602 SEC23AQ15436 765 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 TLDC1Q6P9B6 456 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 SLC30A9Q6PML9 568 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 CEP120Q8N960 986 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 KIAA0895Q8NCT3 520 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 U2AF1L4Q8WU68 220 aaKnown RBP11.71□□□□□ -0.53
CNGA3-201ENST00000272602 P3H4Q92791 437 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 GLG1Q92896 1179 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 FAM129AQ9BZQ8 928 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 DNAJC17Q9NVM6 304 aaKnown RBP11.71□□□□□ -0.53
CNGA3-201ENST00000272602 ABT1Q9ULW3 272 aaKnown RBP11.71□□□□□ -0.53
CNGA3-201ENST00000272602 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.53
CNGA3-201ENST00000272602 LRRD1A4D1F6 860 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 CCDC169A6NNP5 214 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 WNT10BO00744 389 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 CHMP2AO43633 222 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 ALAS1P13196 640 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 ATP2A2P16615 1042 aaKnown RBP11.71□□□□□ -0.54
CNGA3-201ENST00000272602 CTCFP49711 727 aaPredicted RBP11.71□□□□□ -0.54
CNGA3-201ENST00000272602 MEI1Q5TIA1 1274 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 AGBL2Q5U5Z8 902 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 LONP2Q86WA8 852 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 CCDC125Q86Z20 511 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 GLIS3Q8NEA6 775 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 CCHCR1Q8TD31 782 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 KBTBD4Q9NVX7 518 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.54
CNGA3-201ENST00000272602 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.54
CNGA3-201ENST00000272602 PARP4Q9UKK3 1724 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 SCN11AQ9UI33 1791 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 OR52Z1P0C646 297 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 HOXA10P31260 410 aaPredicted RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 SSR1P43307 286 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 FIGNQ5HY92 759 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 STRIP1Q5VSL9 837 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ALKBH5Q6P6C2 394 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 NEK9Q8TD19 979 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 RIOK1Q9BRS2 568 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ELP3Q9H9T3 547 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ARPP21Q9UBL0 812 aaPredicted RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 AGAP1Q9UPQ3 857 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 TCP11X1B4DZS4 312 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 F8VZ95 297 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 FLOT1O75955 427 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 SUN1O94901 812 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 SNUPNO95149 360 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ACTN1P12814 892 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 BYSLQ13895 437 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 CCDC6Q16204 474 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 SLC18A3Q16572 532 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 DACT2Q5SW24 774 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 LMNTD2Q8IXW0 634 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 PIGSQ96S52 555 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 PCDHA4Q9UN74 947 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 DAAM1Q9Y4D1 1078 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 CFAP73A6NFT4 308 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 MYCLP12524 364 aaPredicted RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 EEF2P13639 858 aaKnown RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 FGFR4P22455 802 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 RWDD2BP57060 319 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 SLC29A2Q14542 456 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 NPY5RQ15761 445 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 UBE2SQ16763 222 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ANKRD20A2Q5SQ80 823 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ANKRD20A1Q5TYW2 823 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ANKRD20A3Q5VUR7 823 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 TMC3Q7Z5M5 1100 aa11.7□□□□□ -0.54
CNGA3-201ENST00000272602 ZNF570Q96NI8 536 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms