RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ZNF713Q8N859 430 aaPredicted RBP10.18□□□□□ -0.78
TPM3-201ENST00000271850 SMRP1Q8NCR6 262 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 GJA10Q969M2 543 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 AGXT2Q9BYV1 514 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 ZMYND12Q9H0C1 365 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 ZNF302Q9NR11 478 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 RGS18Q9NS28 235 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 SEPT9Q9UHD8 586 aaPredicted RBP10.18□□□□□ -0.78
TPM3-201ENST00000271850 CD207Q9UJ71 328 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 ST3GAL5Q9UNP4 418 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 GINS2Q9Y248 185 aa10.18□□□□□ -0.78
TPM3-201ENST00000271850 MAFBQ9Y5Q3 323 aaPredicted RBP10.18□□□□□ -0.78
TPM3-201ENST00000271850 BACH1O14867 736 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 PER2O15055 1255 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 ALADP13716 330 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 IBSPP21815 317 aaPredicted RBP10.17□□□□□ -0.78
TPM3-201ENST00000271850 CIITAP33076 1130 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 NRIP1P48552 1158 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 SLC26A2P50443 739 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 CLCN3P51790 818 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 RCAN1P53805 252 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 FAM189BP81408 668 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 COASYQ13057 564 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 HERC4Q5GLZ8 1057 aaPredicted RBP10.17□□□□□ -0.78
TPM3-201ENST00000271850 PDXDC2PQ6P474 469 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 Q6ZUG5 572 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 RBM23Q86U06 439 aaKnown RBP10.17□□□□□ -0.78
TPM3-201ENST00000271850 RNF135Q8IUD6 432 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 TEX2Q8IWB9 1127 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 FEZF2Q8TBJ5 459 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 BRF1Q92994 677 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 PHKBQ93100 1093 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 ZNF668Q96K58 619 aaPredicted RBP10.17□□□□□ -0.78
TPM3-201ENST00000271850 CEP89Q96ST8 783 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 ADAM2Q99965 735 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 ADAMTS10Q9H324 1103 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 SNX14Q9Y5W7 946 aa10.17□□□□□ -0.78
TPM3-201ENST00000271850 TBKBP1A7MCY6 615 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 LOC730098B7Z3J9 87 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 M0QZ92 97 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 NCK2O43639 380 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 RPS6KA5O75582 802 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 STBD1O95210 358 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 RPLP2P05387 115 aaKnown RBP10.16□□□□□ -0.78
TPM3-201ENST00000271850 ATF7P17544 494 aaPredicted RBP10.16□□□□□ -0.78
TPM3-201ENST00000271850 HSPA4P34932 840 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 PBX3P40426 434 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
TPM3-201ENST00000271850 DRP2Q13474 957 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 CBX2Q14781 532 aaPredicted RBP10.16□□□□□ -0.78
TPM3-201ENST00000271850 NPY5RQ15761 445 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 ZNF484Q5JVG2 852 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 RNF20Q5VTR2 975 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 ZNF746Q6NUN9 644 aaPredicted RBP10.16□□□□□ -0.78
TPM3-201ENST00000271850 SYNE3Q6ZMZ3 975 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 TRMT1LQ7Z2T5 733 aaKnown RBP10.16□□□□□ -0.78
TPM3-201ENST00000271850 FBXL16Q8N461 479 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 LRRC71Q8N4P6 559 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 COLGALT1Q8NBJ5 622 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 SUSD6Q92537 303 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 FBXL18Q96ME1 805 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 EPAS1Q99814 870 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 TYW1Q9NV66 732 aaKnown RBP10.16□□□□□ -0.78
TPM3-201ENST00000271850 GABBR1Q9UBS5 961 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 CDH22Q9UJ99 828 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 ZDBF2Q9HCK1 2354 aa10.16□□□□□ -0.78
TPM3-201ENST00000271850 TMEM150BA6NC51 233 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 M0R2N6 131 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 MSH4O15457 936 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 PRPF3O43395 683 aaKnown RBP10.15□□□□□ -0.78
TPM3-201ENST00000271850 CDC45O75419 566 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 FGF18O76093 207 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 STAG3L1P0CL83 205 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 FGFR4P22455 802 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 NDUFV1P49821 464 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 CRYBB1P53674 252 aaPredicted RBP10.15□□□□□ -0.78
TPM3-201ENST00000271850 DUSP6Q16828 381 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 PRR16Q569H4 304 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 CLLU1OSQ5K130 101 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 FAM160B1Q5W0V3 765 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 MIS18BP1Q6P0N0 1132 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 B3GNT9Q6UX72 402 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 SLC24A5Q71RS6 500 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
TPM3-201ENST00000271850 JAKMIP1Q96N16 626 aaKnown RBP10.15□□□□□ -0.78
TPM3-201ENST00000271850 PHOX2BQ99453 314 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 S1PR5Q9H228 398 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 NCOA5Q9HCD5 579 aaKnown RBP10.15□□□□□ -0.78
TPM3-201ENST00000271850 VPS54Q9P1Q0 977 aa10.15□□□□□ -0.78
TPM3-201ENST00000271850 USP15Q9Y4E8 981 aaPredicted RBP10.15□□□□□ -0.78
TPM3-201ENST00000271850 MYH9P35579 1960 aaKnown RBP10.15□□□□□ -0.78
TPM3-201ENST00000271850 HIDE1A8MVS5 230 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 RPS6KB1P23443 525 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 ZNF76P36508 570 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 GPC3P51654 580 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 EVCP57679 992 aa10.14□□□□□ -0.79
TPM3-201ENST00000271850 SETQ01105 290 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms