RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZBBXA8MT70 800 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 DDX39AO00148 427 aaKnown RBP27.3■■□□□ 1.96
SSBP4-201ENST00000270061 LGR5O75473 907 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 ENOX1Q8TC92 643 aaKnown RBP27.3■■□□□ 1.96
SSBP4-201ENST00000270061 LMBR1Q8WVP7 490 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 ZNF577Q9BSK1 485 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 ZNF75DP51815 510 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 ZNF618Q5T7W0 954 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 SV2BQ7L1I2 683 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.3■■□□□ 1.96
SSBP4-201ENST00000270061 FAM161BQ96MY7 647 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 TRIM5Q9C035 493 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 SLC4A7Q9Y6M7 1214 aa27.3■■□□□ 1.96
SSBP4-201ENST00000270061 GRXCR1A8MXD5 290 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 KLRC4O43908 158 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 DNAJB2P25686 324 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 THPOP40225 353 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 ZNF658Q5TYW1 1059 aaPredicted RBP27.29■■□□□ 1.96
SSBP4-201ENST00000270061 LARP4BQ92615 738 aaKnown RBP27.29■■□□□ 1.96
SSBP4-201ENST00000270061 RAD54LQ92698 747 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 PCYT2Q99447 389 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 TRIM9Q9C026 710 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 LRRC27Q9C0I9 530 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 TBC1D22BQ9NU19 505 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 VAV3Q9UKW4 847 aa27.29■■□□□ 1.96
SSBP4-201ENST00000270061 ADAM17P78536 824 aa27.28■■□□□ 1.96
SSBP4-201ENST00000270061 PPFIA1Q13136 1202 aa27.28■■□□□ 1.96
SSBP4-201ENST00000270061 HAUS3Q68CZ6 603 aa27.28■■□□□ 1.96
SSBP4-201ENST00000270061 CNNM4Q6P4Q7 775 aa27.28■■□□□ 1.96
SSBP4-201ENST00000270061 SLC5A5Q92911 643 aa27.28■■□□□ 1.96
SSBP4-201ENST00000270061 UIMC1Q96RL1 719 aa27.28■■□□□ 1.96
SSBP4-201ENST00000270061 GTPBP4Q9BZE4 634 aaKnown RBP27.28■■□□□ 1.96
SSBP4-201ENST00000270061 HSD3B7Q9H2F3 369 aa27.28■■□□□ 1.96
SSBP4-201ENST00000270061 DHX15O43143 795 aaKnown RBP27.27■■□□□ 1.96
SSBP4-201ENST00000270061 ATG7O95352 703 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 CCT6AP40227 531 aaKnown RBP27.27■■□□□ 1.96
SSBP4-201ENST00000270061 GPNMBQ14956 572 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 ERMNQ8TAM6 284 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 PPP1R3GB7ZBB8 358 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 RHOBTB3O94955 611 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 CCNE2O96020 404 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 CDC25BP30305 580 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 STAT5BP51692 787 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 ECM1Q16610 540 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 TRAF7Q6Q0C0 670 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 PLPPR4Q7Z2D5 763 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 KCTD17Q8N5Z5 321 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 MRFAP1L1Q96HT8 127 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 PBX4Q9BYU1 374 aa27.27■■□□□ 1.96
SSBP4-201ENST00000270061 CHD9Q3L8U1 2897 aa27.26■■□□□ 1.95
SSBP4-201ENST00000270061 TMEM265A0A087WTH1 108 aa27.26■■□□□ 1.95
SSBP4-201ENST00000270061 NBNO60934 754 aa27.26■■□□□ 1.95
SSBP4-201ENST00000270061 GRIK4Q16099 956 aa27.26■■□□□ 1.95
SSBP4-201ENST00000270061 SEMA6BQ9H3T3 888 aa27.26■■□□□ 1.95
SSBP4-201ENST00000270061 TCEAL9Q9UHQ7 104 aa27.26■■□□□ 1.95
SSBP4-201ENST00000270061 RSPH10B2B2RC85 870 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 CAND2O75155 1236 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 PSMD10O75832 226 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 CXCL10P02778 98 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 RSPH10BP0C881 870 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 RPA1P27694 616 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 CCDC47Q96A33 483 aaKnown RBP27.25■■□□□ 1.95
SSBP4-201ENST00000270061 BAIAP3O94812 1187 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 CD44P16070 742 aaKnown RBP27.25■■□□□ 1.95
SSBP4-201ENST00000270061 PBX2P40425 430 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 PPP2R5CQ13362 524 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 KMT5BQ4FZB7 885 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 ABHD15Q6UXT9 468 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 TIFAQ96CG3 184 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 TTYH1Q9H313 450 aaPredicted RBP27.25■■□□□ 1.95
SSBP4-201ENST00000270061 TRPC6Q9Y210 931 aa27.25■■□□□ 1.95
SSBP4-201ENST00000270061 BACH1O14867 736 aa27.24■■□□□ 1.95
SSBP4-201ENST00000270061 ATP2A2P16615 1042 aaKnown RBP27.24■■□□□ 1.95
SSBP4-201ENST00000270061 SLC26A2P50443 739 aa27.24■■□□□ 1.95
SSBP4-201ENST00000270061 MCM6Q14566 821 aa27.24■■□□□ 1.95
SSBP4-201ENST00000270061 MBTPS1Q14703 1052 aa27.24■■□□□ 1.95
SSBP4-201ENST00000270061 FAM160B1Q5W0V3 765 aa27.24■■□□□ 1.95
SSBP4-201ENST00000270061 ZNF746Q6NUN9 644 aaPredicted RBP27.24■■□□□ 1.95
SSBP4-201ENST00000270061 MIS18BP1Q6P0N0 1132 aa27.24■■□□□ 1.95
SSBP4-201ENST00000270061 KCNK18Q7Z418 384 aa27.24■■□□□ 1.95
SSBP4-201ENST00000270061 POLR3CQ9BUI4 534 aaPredicted RBP27.24■■□□□ 1.95
SSBP4-201ENST00000270061 IGKV6D-21A0A0A0MT36 114 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 PVALEFA0A1B0GWK0 134 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 RAB30Q15771 203 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 LRCH2Q5VUJ6 765 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 NCAPH2Q6IBW4 605 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 TAF2Q6P1X5 1199 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 CNKSR3Q6P9H4 555 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 MED15Q96RN5 788 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 MSRAQ9UJ68 235 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 EYSQ5T1H1 3165 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 PTPRSQ13332 1948 aa27.23■■□□□ 1.95
SSBP4-201ENST00000270061 RRN3P2A6NIE6 340 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 MED24O75448 989 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 INSRRP14616 1297 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 IGBP1P78318 339 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 KRT76Q01546 638 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 PLCB4Q15147 1175 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 SMAP1Q8IYB5 467 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-201ENST00000270061 GUCD1Q96NT3 240 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms