RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 WDR18Q9BV38 432 aa24.07■■□□□ 1.44
CDR2-201ENST00000268383 THAP2Q9H0W7 228 aa24.07■■□□□ 1.44
CDR2-201ENST00000268383 METTL14Q9HCE5 456 aaKnown RBP24.07■■□□□ 1.44
CDR2-201ENST00000268383 GREB1LQ9C091 1923 aaPredicted RBP24.07■■□□□ 1.44
CDR2-201ENST00000268383 SOX5P35711 763 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 FNTAP49354 379 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 EMC10Q5UCC4 262 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 RASGEF1CQ8N431 466 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 SLC30A5Q8TAD4 765 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 CALR3Q96L12 384 aaKnown RBP24.06■■□□□ 1.44
CDR2-201ENST00000268383 CCDC17Q96LX7 622 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 GPR88Q9GZN0 384 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 WRAP73Q9P2S5 460 aaPredicted RBP24.06■■□□□ 1.44
CDR2-201ENST00000268383 SLC12A6Q9UHW9 1150 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 EYA4O95677 639 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 FMO5P49326 533 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 BMT2Q1RMZ1 405 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 KRT71Q3SY84 523 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 CYFIP2Q96F07 1278 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 GLT8D2Q9H1C3 349 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 KIF13BQ9NQT8 1826 aa24.06■■□□□ 1.44
CDR2-201ENST00000268383 TISP43B9A030 160 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 SLITRK3O94933 977 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 FAM107AO95990 144 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 CFBP00751 764 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 SYDE2Q5VT97 1194 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 ZNF219Q9P2Y4 722 aaPredicted RBP24.05■■□□□ 1.44
CDR2-201ENST00000268383 COG5Q9UP83 839 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 A6NNZ2 444 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 BHMG1C9JSJ3 638 aaPredicted RBP24.05■■□□□ 1.44
CDR2-201ENST00000268383 FERP16591 822 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 RRP1BQ14684 758 aaKnown RBP24.05■■□□□ 1.44
CDR2-201ENST00000268383 TUBB8Q3ZCM7 444 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 MOXD1Q6UVY6 613 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 LRIG3Q6UXM1 1119 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 MKL1Q969V6 931 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 NYAP2Q9P242 653 aa24.05■■□□□ 1.44
CDR2-201ENST00000268383 DDX3YO15523 660 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 PSMC2P35998 433 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 ATP8B4Q8TF62 1192 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 LMBR1Q8WVP7 490 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 GOPCQ9HD26 462 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 SMIM23A6NLE4 172 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 TMEM110-MUSTN1A8MSY1 372 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 SLC16A3O15427 465 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 SHBGP04278 402 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 MKRN4PQ13434 485 aaPredicted RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 HHIPL2Q6UWX4 724 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 SLC20A1Q8WUM9 679 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 ALG3Q92685 438 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 FAM20AQ96MK3 541 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 SIPA1L1O43166 1804 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 LY75O60449 1722 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 A0A1W2PRG0 241 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 CCDC188H7C350 402 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 TBX3O15119 743 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 ATP2C2O75185 946 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 POU5F1Q01860 360 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 SF3B2Q13435 895 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 LLGL1Q15334 1064 aa24.04■■□□□ 1.44
CDR2-201ENST00000268383 TRMT1LQ7Z2T5 733 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 UHMK1Q8TAS1 419 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 UTP11Q9Y3A2 253 aaKnown RBP24.04■■□□□ 1.44
CDR2-201ENST00000268383 GH2P01242 217 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 MARCKSL1P49006 195 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 TBC1D10BQ4KMP7 808 aaPredicted RBP24.03■■□□□ 1.44
CDR2-201ENST00000268383 C1orf186Q6ZWK4 172 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 CCDC26Q8TAB7 109 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 HOOK2Q96ED9 719 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 DDX20Q9UHI6 824 aaKnown RBP24.03■■□□□ 1.44
CDR2-201ENST00000268383 IGLV3-22A0A075B6J6 115 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 MNAT1P51948 309 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 ZNF746Q6NUN9 644 aaPredicted RBP24.03■■□□□ 1.44
CDR2-201ENST00000268383 CTNNBL1Q8WYA6 563 aaPredicted RBP24.03■■□□□ 1.44
CDR2-201ENST00000268383 HSD17B14Q9BPX1 270 aa24.03■■□□□ 1.44
CDR2-201ENST00000268383 LTBP1Q14766 1721 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 PHF20L1A8MW92 1017 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 FOXN3O00409 490 aaPredicted RBP24.02■■□□□ 1.44
CDR2-201ENST00000268383 ECE1P42892 770 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 DLG4P78352 724 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 PHLDB3Q6NSJ2 640 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 CPNE8Q86YQ8 564 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 SYCE1Q8N0S2 351 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 RFFLQ8WZ73 363 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 RAPGEF5Q92565 580 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 FIZ1Q96SL8 496 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 SH2D3AQ9BRG2 576 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 INTS2Q9H0H0 1204 aaKnown RBP24.02■■□□□ 1.44
CDR2-201ENST00000268383 PCIF1Q9H4Z3 704 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 PKD2L1Q9P0L9 805 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 PI4KBQ9UBF8 816 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 SUGT1Q9Y2Z0 365 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 SNX24Q9Y343 169 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 A0A0A6YYK5 440 aaPredicted RBP24.02■■□□□ 1.44
CDR2-201ENST00000268383 GMNCA6NCL1 334 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 GUCY2CP25092 1073 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 PPP2R2AP63151 447 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 PPATQ06203 517 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 ABCB5Q2M3G0 1257 aa24.02■■□□□ 1.44
CDR2-201ENST00000268383 LRCH2Q5VUJ6 765 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms