RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 FMO2Q99518 471 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 CYP3A7-CYP3A51PA0A087WV96 503 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 DDX3YO15523 660 aaKnown RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 GDF11O95390 407 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 CYP3A7P24462 503 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 POU5F1Q01860 360 aaKnown RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 BIRC3Q13489 604 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 SWT1Q5T5J6 900 aaKnown RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 YTHDF3Q7Z739 585 aaKnown RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 ALG3Q92685 438 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 EIF2AK1Q9BQI3 630 aaKnown RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 KLC4Q9NSK0 619 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 COG5Q9UP83 839 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 RABGAP1Q9Y3P9 1069 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
RTN1-201ENST00000267484 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
RTN1-201ENST00000267484 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
RTN1-201ENST00000267484 HAUS2Q9NVX0 235 aa18.34■□□□□ 0.53
RTN1-201ENST00000267484 CLSTN1O94985 981 aa18.34■□□□□ 0.53
RTN1-201ENST00000267484 RPL13P26373 211 aaKnown RBP18.34■□□□□ 0.53
RTN1-201ENST00000267484 SOX5P35711 763 aa18.34■□□□□ 0.53
RTN1-201ENST00000267484 MARCKSL1P49006 195 aa18.34■□□□□ 0.53
RTN1-201ENST00000267484 CPLX4Q7Z7G2 160 aa18.34■□□□□ 0.53
RTN1-201ENST00000267484 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 KRT13P13646 458 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 FERP16591 822 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 ZNF76P36508 570 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 RINT1Q6NUQ1 792 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 SYCE1Q8N0S2 351 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 SLC30A5Q8TAD4 765 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 CRYGNQ8WXF5 182 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.33■□□□□ 0.53
RTN1-201ENST00000267484 MBOAT7Q96N66 472 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 PSMD1Q99460 953 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 ZMYM2Q9UBW7 1377 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 SMCHD1A6NHR9 2005 aa18.33■□□□□ 0.53
RTN1-201ENST00000267484 DR1Q01658 176 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 MTMR3Q13615 1198 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 SELENOSQ9BQE4 189 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 METTL14Q9HCE5 456 aaKnown RBP18.33■□□□□ 0.52
RTN1-201ENST00000267484 ATAD5Q96QE3 1844 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 USP8P40818 1118 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 SLC20A1Q8WUM9 679 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 CTNNBL1Q8WYA6 563 aaPredicted RBP18.33■□□□□ 0.52
RTN1-201ENST00000267484 C18orf8Q96DM3 657 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 BORCS6Q96GS4 357 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 NGLY1Q96IV0 654 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 LRRC4BQ9NT99 713 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 VAV3Q9UKW4 847 aa18.33■□□□□ 0.52
RTN1-201ENST00000267484 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
RTN1-201ENST00000267484 OPLAHO14841 1288 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 FAM13AO94988 1023 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 SLCO1A2P46721 670 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
RTN1-201ENST00000267484 EIF1ADQ8N9N8 165 aaKnown RBP18.32■□□□□ 0.52
RTN1-201ENST00000267484 GPR88Q9GZN0 384 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 EPB41L4BQ9H329 900 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 FMO5P49326 533 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 AGBL2Q5U5Z8 902 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 SAMD1Q6SPF0 538 aaPredicted RBP18.32■□□□□ 0.52
RTN1-201ENST00000267484 MAEAQ7L5Y9 396 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 CPNE8Q86YQ8 564 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 SIAH1Q8IUQ4 282 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 BANK1Q8NDB2 785 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 FBXO25Q8TCJ0 367 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 RFFLQ8WZ73 363 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 KRT35Q92764 455 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 NAP1L4Q99733 375 aaKnown RBP18.32■□□□□ 0.52
RTN1-201ENST00000267484 NCAPGQ9BPX3 1015 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 APOBEC3HQ6NTF7 200 aaKnown RBP18.32■□□□□ 0.52
RTN1-201ENST00000267484 CACNA2D3Q8IZS8 1091 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 MTFR1LQ9H019 292 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 FAM114A2Q9NRY5 505 aa18.32■□□□□ 0.52
RTN1-201ENST00000267484 ADAMTSL1Q8N6G6 1762 aa18.31■□□□□ 0.52
RTN1-201ENST00000267484 A0A0A6YYK5 440 aaPredicted RBP18.31■□□□□ 0.52
RTN1-201ENST00000267484 CTNND1O60716 968 aaKnown RBP18.31■□□□□ 0.52
RTN1-201ENST00000267484 RASSF9O75901 435 aa18.31■□□□□ 0.52
RTN1-201ENST00000267484 IFI35P80217 286 aaPredicted RBP18.31■□□□□ 0.52
RTN1-201ENST00000267484 SETQ01105 290 aaPredicted RBP18.31■□□□□ 0.52
RTN1-201ENST00000267484 ANKRD20A8PQ5CZ79 823 aa18.31■□□□□ 0.52
RTN1-201ENST00000267484 DYDC2Q96IM9 177 aa18.31■□□□□ 0.52
RTN1-201ENST00000267484 DAAM1Q9Y4D1 1078 aa18.31■□□□□ 0.52
RTN1-201ENST00000267484 PSMC2P35998 433 aaKnown RBP18.31■□□□□ 0.52
RTN1-201ENST00000267484 SMTNP53814 917 aa18.31■□□□□ 0.52
RTN1-201ENST00000267484 PPATQ06203 517 aa18.31■□□□□ 0.52
RTN1-201ENST00000267484 ZKSCAN4Q969J2 545 aaPredicted RBP18.31■□□□□ 0.52
RTN1-201ENST00000267484 RNF25Q96BH1 459 aaPredicted RBP18.31■□□□□ 0.52
RTN1-201ENST00000267484 TISP43B9A030 160 aa18.3■□□□□ 0.52
RTN1-201ENST00000267484 DHX37Q8IY37 1157 aaKnown RBP18.3■□□□□ 0.52
RTN1-201ENST00000267484 SEC14L1Q92503 715 aa18.3■□□□□ 0.52
RTN1-201ENST00000267484 TATDN2Q93075 761 aa18.3■□□□□ 0.52
RTN1-201ENST00000267484 AMNQ9BXJ7 453 aa18.3■□□□□ 0.52
RTN1-201ENST00000267484 FOXN3O00409 490 aaPredicted RBP18.3■□□□□ 0.52
RTN1-201ENST00000267484 SLC16A3O15427 465 aaKnown RBP18.3■□□□□ 0.52
RTN1-201ENST00000267484 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms