RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MCF2LO15068 1137 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 ARPP19P56211 112 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 KCTD16Q68DU8 428 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 EP400NLQ6ZTU2 488 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 CACNA2D3Q8IZS8 1091 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 KLHL14Q9P2G3 628 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 ATP8A1Q9Y2Q0 1164 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 NMT1P30419 496 aaKnown RBP16.59■□□□□ 0.25
TIMP3-201ENST00000266085 STAT5BP51692 787 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 ARHGEF2Q92974 986 aaKnown RBP16.59■□□□□ 0.25
TIMP3-201ENST00000266085 PARD6BQ9BYG5 372 aa16.59■□□□□ 0.25
TIMP3-201ENST00000266085 DSTYKQ6XUX3 929 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 ERICH1Q86X53 443 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 ZDHHC15Q96MV8 337 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 SLC4A9Q96Q91 983 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 TRIM49P0CI25 452 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 TRIM49CP0CI26 452 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 VAMP7P51809 220 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 CCDC144BQ3MJ40 725 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 TUFT1Q9NNX1 390 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 PFDN4Q9NQP4 134 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 AFG3L2Q9Y4W6 797 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 SCINQ9Y6U3 715 aa16.58■□□□□ 0.25
TIMP3-201ENST00000266085 SEC31AO94979 1220 aaKnown RBP16.58■□□□□ 0.24
TIMP3-201ENST00000266085 GGPS1O95749 300 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 SMARCA1P28370 1054 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 TOGARAM2Q6ZUX3 1019 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 ADAM22Q9P0K1 906 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 POC1B-GALNT4F8VUJ3 575 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
TIMP3-201ENST00000266085 YWHABP31946 246 aaKnown RBP16.58■□□□□ 0.24
TIMP3-201ENST00000266085 DYNLT1P63172 113 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 CCNYQ8ND76 341 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 ACER1Q8TDN7 264 aa16.58■□□□□ 0.24
TIMP3-201ENST00000266085 PRPSAP2O60256 369 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 BUB1BO60566 1050 aaPredicted RBP16.57■□□□□ 0.24
TIMP3-201ENST00000266085 RWDD2BP57060 319 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 ANKRD40Q6AI12 368 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 ADGRA1Q86SQ6 560 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 ATG4CQ96DT6 458 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 AGBL1Q96MI9 1066 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
TIMP3-201ENST00000266085 TNPO2O14787 897 aaKnown RBP16.57■□□□□ 0.24
TIMP3-201ENST00000266085 SH3BP5O60239 455 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 INHBAP08476 426 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 DHX9Q08211 1270 aaKnown RBP16.57■□□□□ 0.24
TIMP3-201ENST00000266085 CYP4F22Q6NT55 531 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 DHX40Q8IX18 779 aaKnown RBP16.57■□□□□ 0.24
TIMP3-201ENST00000266085 SIX6OS1Q8N1H7 587 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 C2orf40Q9H1Z8 148 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 TBX3O15119 743 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 KCNB2Q92953 911 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 NPHP3-ACAD11A0A0J9YXS1 232 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 A0A1W2PQC6 194 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 CCDC188H7C350 402 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 RASSF2P50749 326 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 TAF1CQ15572 869 aaPredicted RBP16.57■□□□□ 0.24
TIMP3-201ENST00000266085 TMEM270Q6UE05 265 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 PPP4R1Q8TF05 950 aa16.57■□□□□ 0.24
TIMP3-201ENST00000266085 SPATA24Q86W54 205 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 ANAPC5Q9UJX4 755 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.56■□□□□ 0.24
TIMP3-201ENST00000266085 MIF4GDA9UHW6 222 aaKnown RBP16.56■□□□□ 0.24
TIMP3-201ENST00000266085 TNFAIP2Q03169 654 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 ZNF699Q32M78 642 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 GPATCH11Q8N954 259 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 KCTD6Q8NC69 237 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 NGRNQ9NPE2 291 aaKnown RBP16.56■□□□□ 0.24
TIMP3-201ENST00000266085 CNOT8Q9UFF9 292 aaKnown RBP16.56■□□□□ 0.24
TIMP3-201ENST00000266085 MAD2L2Q9UI95 211 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 INPP5FQ9Y2H2 1132 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 ANO9A1A5B4 782 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 CSPG5O95196 566 aa16.56■□□□□ 0.24
TIMP3-201ENST00000266085 ESYT2A0FGR8 921 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 FGGP02679 453 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 CXCL9Q07325 125 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 STK4Q13043 487 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 XKR3Q5GH77 459 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 KRT39Q6A163 491 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 BBS5Q8N3I7 341 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 MRPL4Q9BYD3 311 aaKnown RBP16.55■□□□□ 0.24
TIMP3-201ENST00000266085 MTFR1LQ9H019 292 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 CCDC68Q9H2F9 335 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 ECE1P42892 770 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 PDE1BQ01064 536 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 SNAPC2Q13487 334 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 CCHCR1Q8TD31 782 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 AP1M1Q9BXS5 423 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 INTS9Q9NV88 658 aaKnown RBP16.55■□□□□ 0.24
TIMP3-201ENST00000266085 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 KCNV1Q6PIU1 500 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.55■□□□□ 0.24
TIMP3-201ENST00000266085 SPDYE2BA6NHP3 402 aa16.55■□□□□ 0.24
TIMP3-201ENST00000266085 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
TIMP3-201ENST00000266085 PALMO75781 387 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms