RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ARHGEF2Q92974 986 aaKnown RBP18■□□□□ 0.47
PHRF1-201ENST00000264555 IL17RAQ96F46 866 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 TIPINQ9BVW5 301 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 IRX2Q9BZI1 471 aaPredicted RBP18■□□□□ 0.47
PHRF1-201ENST00000264555 NACA2Q9H009 215 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 PNMA3Q9UL41 463 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 POC1B-GALNT4F8VUJ3 575 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 NCK2O43639 380 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 SOX5P35711 763 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 TERF2Q15554 542 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 REEP2Q9BRK0 252 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 AP5M1Q9H0R1 490 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 KCND2Q9NZV8 630 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 MCF2LO15068 1137 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 GYPCP04921 128 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 NMT1P30419 496 aaKnown RBP17.99■□□□□ 0.47
PHRF1-201ENST00000264555 IL9RQ01113 521 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 MAPK6Q16659 721 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 RAD9BQ6WBX8 426 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 ADAM22Q9P0K1 906 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 ZNF70Q9UC06 446 aaPredicted RBP17.99■□□□□ 0.47
PHRF1-201ENST00000264555 LRRD1A4D1F6 860 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 WDR46O15213 610 aaKnown RBP17.99■□□□□ 0.47
PHRF1-201ENST00000264555 NR1D1P20393 614 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 YWHAGP61981 247 aaKnown RBP eCLIP17.99■□□□□ 0.474e-6■■■■□ 21.1
PHRF1-201ENST00000264555 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 RAB3IL1Q8TBN0 382 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 RPAP3Q9H6T3 665 aaPredicted RBP17.99■□□□□ 0.47
PHRF1-201ENST00000264555 AGPAT5Q9NUQ2 364 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 RPS6KC1Q96S38 1066 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 SNX25Q9H3E2 840 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 ANAPC7Q9UJX3 599 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 GEN1Q17RS7 908 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 RSBN1LQ6PCB5 846 aaPredicted RBP17.99■□□□□ 0.47
PHRF1-201ENST00000264555 NME8Q8N427 588 aa17.99■□□□□ 0.47
PHRF1-201ENST00000264555 BUB1BO60566 1050 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-201ENST00000264555 TRIM49P0CI25 452 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 TRIM49CP0CI26 452 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 A0A1W2PQJ5 194 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 TARSL2A2RTX5 802 aaKnown RBP17.98■□□□□ 0.47
PHRF1-201ENST00000264555 SART1O43290 800 aaKnown RBP17.98■□□□□ 0.47
PHRF1-201ENST00000264555 ANXA13P27216 316 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 CFAP57Q96MR6 1250 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 VCPKMTQ9H867 229 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 PSMC4P43686 418 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 KCTD6Q8NC69 237 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 LRRC8CQ8TDW0 803 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.98■□□□□ 0.473e-7■■■□□ 16
PHRF1-201ENST00000264555 POLLQ9UGP5 575 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 NOVA2Q9UNW9 492 aaKnown RBP17.98■□□□□ 0.47
PHRF1-201ENST00000264555 RASGRF2O14827 1237 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 GYS1P13807 737 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 CNGA1P29973 690 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 YWHABP31946 246 aaKnown RBP17.98■□□□□ 0.47
PHRF1-201ENST00000264555 SLC12A2P55011 1212 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 SCARA5Q6ZMJ2 495 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 RSPH3Q86UC2 560 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 RTFDC1Q9BY42 306 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-201ENST00000264555 EPC1Q9H2F5 836 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 LCMT1Q9UIC8 334 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 MORC2Q9Y6X9 1032 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-201ENST00000264555 EMSYQ7Z589 1322 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 PITPNM2Q9BZ72 1349 aa17.98■□□□□ 0.47
PHRF1-201ENST00000264555 IFNAR2P48551 515 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 EN1Q05925 392 aaPredicted RBP17.97■□□□□ 0.47
PHRF1-201ENST00000264555 SLC18A3Q16572 532 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 CYP4F22Q6NT55 531 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 ENOSF1Q7L5Y1 443 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 THNSL1Q8IYQ7 743 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 CCDC197Q8NCU1 140 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 MAD1L1Q9Y6D9 718 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 SUN1O94901 812 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 FTLP02792 175 aaPredicted RBP17.97■□□□□ 0.47
PHRF1-201ENST00000264555 RPA1P27694 616 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 ZNF667Q5HYK9 610 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 NYAP1Q6ZVC0 841 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 TXNRD3Q86VQ6 643 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 GLYCTKQ8IVS8 523 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 RILPQ96NA2 401 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 ADAM21Q9UKJ8 722 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 INHBAP08476 426 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 TMEM35BQ8NCS4 154 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 MORC4Q8TE76 937 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
PHRF1-201ENST00000264555 SEPT10Q9P0V9 454 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 SNX12Q9UMY4 172 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 CRCPO75575 148 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 C6orf118Q5T5N4 469 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 OR6B2Q6IFH4 312 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 VGLL2Q8N8G2 317 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 RFFLQ8WZ73 363 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 CCT6BQ92526 530 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 CDKL2Q92772 493 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 CALN1Q9BXU9 219 aa17.97■□□□□ 0.47
PHRF1-201ENST00000264555 POLR3FQ9H1D9 316 aaPredicted RBP17.97■□□□□ 0.47
PHRF1-201ENST00000264555 SALL1Q9NSC2 1324 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms