RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 PCYT2Q99447 389 aa9.14□□□□□ -0.95
COPS4-201ENST00000264389 ZHX1Q9UKY1 873 aaPredicted RBP9.14□□□□□ -0.95
COPS4-201ENST00000264389 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.14□□□□□ -0.95
COPS4-201ENST00000264389 A0A1W2PQC6 194 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 CCDC169A6NNP5 214 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
COPS4-201ENST00000264389 LGR5O75473 907 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 PPP1R37O75864 691 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 TOMM70O94826 608 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 RFC5P40937 340 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 SMTNP53814 917 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 CCZ1BP86790 482 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 CCZ1P86791 482 aaPredicted RBP9.13□□□□□ -0.95
COPS4-201ENST00000264389 KCNA1Q09470 495 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 MAP2K5Q13163 448 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 TBX2Q13207 712 aaPredicted RBP9.13□□□□□ -0.95
COPS4-201ENST00000264389 CRHR2Q13324 411 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 TAPT1Q6NXT6 567 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 C17orf99Q6UX52 265 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 HS2ST1Q7LGA3 356 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 TRIM50Q86XT4 487 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 KSR1Q8IVT5 923 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 MSL3Q8N5Y2 521 aaKnown RBP9.13□□□□□ -0.95
COPS4-201ENST00000264389 CCDC112Q8NEF3 446 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 GOLGA5Q8TBA6 731 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 SLC7A3Q8WY07 619 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 HVCN1Q96D96 273 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 ACCSQ96QU6 501 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 TINF2Q9BSI4 451 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 GBP3Q9H0R5 595 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 POLR3FQ9H1D9 316 aaPredicted RBP9.13□□□□□ -0.95
COPS4-201ENST00000264389 ABHD16BQ9H3Z7 469 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 TMEM206Q9H813 350 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 C17orf75Q9HAS0 396 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 XPNPEP1Q9NQW7 623 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 NRBP2Q9NSY0 501 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 PYCARDQ9ULZ3 195 aa9.13□□□□□ -0.95
COPS4-201ENST00000264389 RBM47A0AV96 593 aaKnown RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 CLIC2O15247 247 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 SLC16A4O15374 487 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 TGFB1I1O43294 461 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 SNAI1O95863 264 aaPredicted RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 EPB41P11171 864 aaKnown RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 MARK3P27448 753 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 ADCYAP1R1P41586 468 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 RTP1P59025 263 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 NFIL3Q16649 462 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 VWA3BQ502W6 1294 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 MIIPQ5JXC2 388 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 MORN1Q5T089 497 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 CYP4F22Q6NT55 531 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 HAUS6Q7Z4H7 955 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 CNGA4Q8IV77 575 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 SOCS4Q8WXH5 440 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 IFT74Q96LB3 600 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 PCMTD1Q96MG8 357 aaPredicted RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 STRA6Q9BX79 667 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 NIFKQ9BYG3 293 aaKnown RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 KATNBL1Q9H079 304 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 NDST4Q9H3R1 872 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 ST6GALNAC4Q9H4F1 302 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 RRAGDQ9NQL2 400 aaPredicted RBP9.12□□□□□ -0.95
COPS4-201ENST00000264389 KMT5AQ9NQR1 393 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 PPME1Q9Y570 386 aa9.12□□□□□ -0.95
COPS4-201ENST00000264389 AKR1B15C9JRZ8 316 aaPredicted RBP9.11□□□□□ -0.95
COPS4-201ENST00000264389 H0YCG3 227 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 TNPO2O14787 897 aaKnown RBP9.11□□□□□ -0.95
COPS4-201ENST00000264389 MFAP3LO75121 409 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 GYPCP04921 128 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 SKILP12757 684 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 RGS2P41220 211 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 NPTX2P47972 431 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 TM4SF4P48230 202 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 SLC26A2P50443 739 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 SOX10P56693 466 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 GTF2BQ00403 316 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 GOLGA8FQ08AF8 430 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 GOLGA8DPQ0D2H9 430 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 TBC1D8BQ0IIM8 1120 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 ACVR2BQ13705 512 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 TMEM63BQ5T3F8 832 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 GJC2Q5T442 439 aaPredicted RBP9.11□□□□□ -0.95
COPS4-201ENST00000264389 CEP135Q66GS9 1140 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 PLPPR4Q7Z2D5 763 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 FRMD5Q7Z6J6 570 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 PPTC7Q8NI37 304 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 ATP8B4Q8TF62 1192 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 APBA2Q99767 749 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 SMARCAD1Q9H4L7 1026 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 DHX33Q9H6R0 707 aaKnown RBP9.11□□□□□ -0.95
COPS4-201ENST00000264389 PDLIM7Q9NR12 457 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 AGPAT3Q9NRZ7 376 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 EXOC7Q9UPT5 735 aa9.11□□□□□ -0.95
COPS4-201ENST00000264389 TRPC6Q9Y210 931 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms