RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 STRN3Q13033 797 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 PICALMQ13492 652 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 SGO2Q562F6 1265 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 OLFML2BQ68BL8 750 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 KIAA0825Q8IV33 1275 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 TTC8Q8TAM2 541 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 TGFBRAP1Q8WUH2 860 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 BAP1Q92560 729 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 AK8Q96MA6 479 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 VCX3BQ9H321 246 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 VCX3AQ9NNX9 186 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 ASAP2O43150 1006 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 RTN2O75298 545 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 ECEL1O95672 775 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 CHRNDQ07001 517 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 OVGP1Q12889 678 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 GRIK3Q13003 919 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 ZFP69BQ9UJL9 534 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 NEO1Q92859 1461 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 ABCC6O95255 1503 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 TLR2O60603 784 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 DLATP10515 647 aaKnown RBP17.51■□□□□ 0.39
GPC1-201ENST00000264039 RPL13P26373 211 aaKnown RBP17.51■□□□□ 0.39
GPC1-201ENST00000264039 LACTB2Q53H82 288 aaPredicted RBP17.51■□□□□ 0.39
GPC1-201ENST00000264039 PLVAPQ9BX97 442 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 NPHS2Q9NP85 383 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 PICK1Q9NRD5 415 aa17.51■□□□□ 0.39
GPC1-201ENST00000264039 GOLGA8RI6L899 631 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 PHLDB3Q6NSJ2 640 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 FITM2Q8N6M3 262 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 CEP70Q8NHQ1 597 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 JDP2Q8WYK2 163 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 IQCGQ9H095 443 aaKnown RBP17.5■□□□□ 0.39
GPC1-201ENST00000264039 UBN1Q9NPG3 1134 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 TTC7AQ9ULT0 858 aaPredicted RBP17.5■□□□□ 0.39
GPC1-201ENST00000264039 ATMINO43313 823 aaPredicted RBP17.5■□□□□ 0.39
GPC1-201ENST00000264039 TNFRSF8P28908 595 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 BLMHQ13867 455 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 SEC23AQ15436 765 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 ARHGAP22Q7Z5H3 698 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 ADGRA1Q86SQ6 560 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 MAB21L3Q8N8X9 362 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 IKBKGQ9Y6K9 419 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 EXOC1LA0A1B0GW35 172 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 CAPN9O14815 690 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 FAM13AO94988 1023 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 PPP1R15BQ5SWA1 713 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 KAZNQ674X7 775 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 CENPPQ6IPU0 288 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 RGL1Q9NZL6 768 aa17.5■□□□□ 0.39
GPC1-201ENST00000264039 GNA14O95837 355 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 TROVE2P10155 538 aaKnown RBP eCLIP17.49■□□□□ 0.39
GPC1-201ENST00000264039 RARAP10276 462 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 EZH1Q92800 747 aaPredicted RBP17.49■□□□□ 0.39
GPC1-201ENST00000264039 RMDN2Q96LZ7 410 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 BZW2Q9Y6E2 419 aaKnown RBP17.49■□□□□ 0.39
GPC1-201ENST00000264039 CIB2O75838 187 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 GAS8O95995 478 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 SETSIPP0DME0 302 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 ATF2P15336 505 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
GPC1-201ENST00000264039 FAM161BQ96MY7 647 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 EBF2Q9HAK2 575 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 ANAPC5Q9UJX4 755 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 ATP9AO75110 1047 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 CETN1Q12798 172 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 MAP7Q14244 749 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 TLDC1Q6P9B6 456 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 MAGEC3Q8TD91 643 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.49■□□□□ 0.392e-7■■■■■ 67
GPC1-201ENST00000264039 RILPQ96NA2 401 aa17.49■□□□□ 0.39
GPC1-201ENST00000264039 MST1RQ04912 1400 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 POTEB3A0JP26 581 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 POTECB2RU33 542 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 PJA2O43164 708 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 ESRRAP11474 423 aaPredicted RBP17.48■□□□□ 0.39
GPC1-201ENST00000264039 PTDSS1P48651 473 aaKnown RBP17.48■□□□□ 0.39
GPC1-201ENST00000264039 POTEBQ6S5H4 581 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 MYCT1Q8N699 235 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 PPP1R14CQ8TAE6 165 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 RNF25Q96BH1 459 aaPredicted RBP17.48■□□□□ 0.39
GPC1-201ENST00000264039 POP1Q99575 1024 aaKnown RBP17.48■□□□□ 0.39
GPC1-201ENST00000264039 KLF6Q99612 283 aaPredicted RBP17.48■□□□□ 0.39
GPC1-201ENST00000264039 C7orf25Q9BPX7 421 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 NKX1-2Q9UD57 310 aaPredicted RBP17.48■□□□□ 0.39
GPC1-201ENST00000264039 MYH13Q9UKX3 1938 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 EXOC3O60645 756 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 CACNA2D1P54289 1103 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 ROR2Q01974 943 aaKnown RBP17.48■□□□□ 0.39
GPC1-201ENST00000264039 NUDT12Q9BQG2 462 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 SLC5A4Q9NY91 659 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 A0A1B0GVG6 124 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 ADCY7P51828 1080 aa17.48■□□□□ 0.39
GPC1-201ENST00000264039 MAGEF1Q9HAY2 307 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms