RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 C17orf75Q9HAS0 396 aa13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 MAGEF1Q9HAY2 307 aa13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 LARSQ9P2J5 1176 aaKnown RBP13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 FBXO2Q9UK22 296 aaPredicted RBP13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 TELO2Q9Y4R8 837 aa13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 COL4A3BPQ9Y5P4 624 aa13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 CDY2AQ9Y6F7 541 aa13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 A0A0C4DFX4 3053 aa13.93□□□□□ -0.18
CLNS1A-201ENST00000263309 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 DENND3A2RUS2 1198 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 TBCAO75347 108 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 ERLIN2O94905 339 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 AMHP03971 560 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 PLA2G4BP0C869 781 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 SRGAP2CP0DJJ0 459 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 SKIP12755 728 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 CYP11B2P19099 503 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 NFX1Q12986 1120 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 HYIQ5T013 277 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 TSHZ1Q6ZSZ6 1077 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 SRGAP1Q7Z6B7 1085 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 HACE1Q8IYU2 909 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 SYT2Q8N9I0 419 aaPredicted RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 DEPTORQ8TB45 409 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 ZBED2Q9BTP6 218 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 IFIH1Q9BYX4 1025 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 DHX33Q9H6R0 707 aaKnown RBP13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 DACT1Q9NYF0 836 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 LRFN2Q9ULH4 789 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 SLC4A7Q9Y6M7 1214 aa13.92□□□□□ -0.18
CLNS1A-201ENST00000263309 STAG3L1P0CL83 205 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 EIF4BP23588 611 aaKnown RBP13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 CDC25AP30304 524 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 CLCN3P51790 818 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 EFNA5P52803 228 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 DMP1Q13316 513 aaPredicted RBP13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 DHX8Q14562 1220 aaKnown RBP13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 RUFY4Q6ZNE9 571 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 STXBP4Q6ZWJ1 553 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 MAEAQ7L5Y9 396 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 TDHQ8IZJ6 230 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 PRPF31Q8WWY3 499 aaKnown RBP13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 LARP4BQ92615 738 aaKnown RBP13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 SCLYQ96I15 445 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 RNPC3Q96LT9 517 aaKnown RBP13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 NLRP4Q96MN2 994 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 PLIN2Q99541 437 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 ZHX3Q9H4I2 956 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
CLNS1A-201ENST00000263309 CUL9Q8IWT3 2517 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 CCDC169A6NNP5 214 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 E9PMD0 336 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 FAM13AO94988 1023 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 VTNP04004 478 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 CMA1P23946 247 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 STRN3Q13033 797 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 PKP1Q13835 747 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 IL17AQ16552 155 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 PHOSPHO2Q8TCD6 241 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 LEO1Q8WVC0 666 aaPredicted RBP13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 RAD54LQ92698 747 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 TMEM143Q96AN5 459 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 CLIC6Q96NY7 704 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 SH2D3AQ9BRG2 576 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 PANK2Q9BZ23 570 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 CHST12Q9NRB3 414 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
CLNS1A-201ENST00000263309 COL6A3P12111 3177 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 LRRIQ4A6NIV6 560 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 PP2D1A8MPX8 630 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 PLCG1P19174 1290 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 AXLP30530 894 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 LAMTOR4Q0VGL1 99 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 SPECC1Q5M775 1068 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 CATSPER4Q7RTX7 472 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 C1orf112Q9NSG2 853 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 MSRAQ9UJ68 235 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 KCNH3Q9ULD8 1083 aa13.89□□□□□ -0.19
CLNS1A-201ENST00000263309 A0A1W2PQ27 194 aa13.88□□□□□ -0.19
CLNS1A-201ENST00000263309 A0A1W2PQ64 194 aa13.88□□□□□ -0.19
CLNS1A-201ENST00000263309 A0A1W2PQD8 194 aa13.88□□□□□ -0.19
CLNS1A-201ENST00000263309 ZBTB42B2RXF5 422 aa13.88□□□□□ -0.19
CLNS1A-201ENST00000263309 INO80B-WBP1J3KQ70 363 aa13.88□□□□□ -0.19
CLNS1A-201ENST00000263309 K7ERI5 159 aa13.88□□□□□ -0.19
CLNS1A-201ENST00000263309 STBD1O95210 358 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms