RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ADCY6O43306 1168 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 CALUO43852 315 aaPredicted RBP25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 PBX1P40424 430 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 PSMC4P43686 418 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 SOX10P56693 466 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 PRAMEF19Q5SWL8 479 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 FILIP1Q7Z7B0 1213 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 CREBRFQ8IUR6 639 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 SPIRE2Q8WWL2 714 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 BSNDQ8WZ55 320 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 NTPCRQ9BSD7 190 aaKnown RBP25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 TUBGCP2Q9BSJ2 902 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 CFHR5Q9BXR6 569 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 ARHGAP39Q9C0H5 1083 aa25.21■■□□□ 1.63
SMARCB1-201ENST00000263121 HOXD8P13378 290 aaPredicted RBP25.2■■□□□ 1.63
SMARCB1-201ENST00000263121 MARK3P27448 753 aa25.2■■□□□ 1.63
SMARCB1-201ENST00000263121 CYP2C19P33261 490 aa25.2■■□□□ 1.63
SMARCB1-201ENST00000263121 GTF2BQ00403 316 aa25.2■■□□□ 1.63
SMARCB1-201ENST00000263121 DMP1Q13316 513 aaPredicted RBP25.2■■□□□ 1.63
SMARCB1-201ENST00000263121 NFIL3Q16649 462 aa25.2■■□□□ 1.63
SMARCB1-201ENST00000263121 KSR1Q8IVT5 923 aa25.2■■□□□ 1.63
SMARCB1-201ENST00000263121 LGALS2P05162 132 aa25.2■■□□□ 1.62
SMARCB1-201ENST00000263121 NPTX2P47972 431 aa25.2■■□□□ 1.62
SMARCB1-201ENST00000263121 TNFAIP2Q03169 654 aa25.2■■□□□ 1.62
SMARCB1-201ENST00000263121 HAUS6Q7Z4H7 955 aa25.2■■□□□ 1.62
SMARCB1-201ENST00000263121 SLC7A3Q8WY07 619 aa25.2■■□□□ 1.62
SMARCB1-201ENST00000263121 POLR3FQ9H1D9 316 aaPredicted RBP25.2■■□□□ 1.62
SMARCB1-201ENST00000263121 LGALS16A8MUM7 142 aa25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 ZBTB42B2RXF5 422 aa25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 MAFO75444 373 aaPredicted RBP25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 XRCC5P13010 732 aaKnown RBP25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 NR2F2P24468 414 aa25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 MTIF2P46199 727 aaKnown RBP25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 MARSP56192 900 aaKnown RBP25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 PTPN21Q16825 1174 aa25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 OR6J1Q8NGC5 347 aa25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 ERAP1Q9NZ08 941 aa25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 GNEQ9Y223 722 aaKnown RBP25.19■■□□□ 1.62
SMARCB1-201ENST00000263121 CETN3O15182 167 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 SLC16A4O15374 487 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 PPFIA4O75335 1185 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 GNA14O95837 355 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 SMTNP53814 917 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 ADAM9Q13443 819 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 SPECC1LQ69YQ0 1117 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 TMEM161BQ8NDZ6 487 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 HVCN1Q96D96 273 aa25.18■■□□□ 1.62
SMARCB1-201ENST00000263121 HBP1O60381 514 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 TBC1D8O95759 1140 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 NR3C1P04150 777 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 MMP3P08254 477 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 ARL2P36404 184 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 GSDMDP57764 484 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 TBX2Q13207 712 aaPredicted RBP25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 MIIPQ5JXC2 388 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 ACCSQ96QU6 501 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 GBP3Q9H0R5 595 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 IKZF4Q9H2S9 585 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 TMEM206Q9H813 350 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 KMT5AQ9NQR1 393 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 CCDC169A6NNP5 214 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 PRKCSHP14314 528 aaPredicted RBP25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 MAP2K2P36507 400 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 TMEM143Q96AN5 459 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 IFT74Q96LB3 600 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 C16orf70Q9BSU1 422 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 KCNF1Q9H3M0 494 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 GABRQQ9UN88 632 aa25.17■■□□□ 1.62
SMARCB1-201ENST00000263121 TPM2P07951 284 aa25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 RPL13P26373 211 aaKnown RBP25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 HS2ST1Q7LGA3 356 aa25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 GOLGA5Q8TBA6 731 aa25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 KCNN1Q92952 543 aa25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 ZNF830Q96NB3 372 aaPredicted RBP25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 NOC4LQ9BVI4 516 aaKnown RBP25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 AGPAT3Q9NRZ7 376 aa25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 KCNG1Q9UIX4 513 aa25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 TRPC6Q9Y210 931 aa25.16■■□□□ 1.62
SMARCB1-201ENST00000263121 ITIH6Q6UXX5 1313 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 ADGRA3Q8IWK6 1321 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 IGKV6-21A0A0C4DH24 114 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 SP3Q02447 781 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 TBC1D8BQ0IIM8 1120 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 MAN2A1Q16706 1144 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 EXOC8Q8IYI6 725 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 KIFC3Q9BVG8 833 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 RNPEPQ9H4A4 650 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 ZKSCAN5Q9Y2L8 839 aa25.15■■□□□ 1.62
SMARCB1-201ENST00000263121 THSD7BQ9C0I4 1608 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 CLIC2O15247 247 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 GAS2O43903 313 aaKnown RBP25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 GLRA2P23416 452 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 VEGFBP49765 207 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 FLT3LGP49771 235 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 DNM2P50570 870 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 CAP1Q01518 475 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 UBXN1Q04323 297 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 ARID5BQ14865 1188 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms