RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 SPAG5Q96R06 1193 aa24.6■■□□□ 1.53
MCF2L-201ENST00000261963 FIZ1Q96SL8 496 aa24.6■■□□□ 1.53
MCF2L-201ENST00000261963 EIF3DO15371 548 aaKnown RBP eCLIP24.59■■□□□ 1.53
MCF2L-201ENST00000261963 VIL1P09327 827 aaKnown RBP24.59■■□□□ 1.53
MCF2L-201ENST00000261963 TNFRSF8P28908 595 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 CEP55Q53EZ4 464 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 ZC2HC1CQ53FD0 456 aaPredicted RBP24.59■■□□□ 1.53
MCF2L-201ENST00000261963 MEI1Q5TIA1 1274 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 PCDHB13Q9Y5F0 798 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 GRID2IPA4D2P6 1211 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 DLGAP5Q15398 846 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 ZYXQ15942 572 aaKnown RBP24.59■■□□□ 1.53
MCF2L-201ENST00000261963 MYCT1Q8N699 235 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 CHURC1Q8WUH1 139 aa24.59■■□□□ 1.53
MCF2L-201ENST00000261963 GAS7O60861 476 aa24.58■■□□□ 1.53
MCF2L-201ENST00000261963 ARP10275 920 aa24.58■■□□□ 1.53
MCF2L-201ENST00000261963 GUCY1A3Q02108 690 aa24.58■■□□□ 1.53
MCF2L-201ENST00000261963 SPDYE2Q495Y8 402 aa24.58■■□□□ 1.53
MCF2L-201ENST00000261963 FBXO28Q9NVF7 368 aa24.58■■□□□ 1.53
MCF2L-201ENST00000261963 GGA2Q9UJY4 613 aa24.58■■□□□ 1.53
MCF2L-201ENST00000261963 FBXL5Q9UKA1 691 aa24.58■■□□□ 1.53
MCF2L-201ENST00000261963 BTNL10A8MVZ5 291 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 RASSF9O75901 435 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 KRT14P02533 472 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 PRKCIP41743 596 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 JAM2P57087 298 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 CFAP221Q4G0U5 840 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 GLIS2Q9BZE0 524 aaPredicted RBP24.57■■□□□ 1.52
MCF2L-201ENST00000261963 UNC45AQ9H3U1 944 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 RNF14Q9UBS8 474 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 MRPL11Q9Y3B7 192 aaKnown RBP24.57■■□□□ 1.52
MCF2L-201ENST00000261963 FRMPD4Q14CM0 1322 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 PPP1R37O75864 691 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 PTGISQ16647 500 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 CFAP58Q5T655 872 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 EMC10Q5UCC4 262 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 B3GNT9Q6UX72 402 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 CCDC13Q8IYE1 715 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 PARVGQ9HBI0 331 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 VEZTQ9HBM0 779 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 GCNT4Q9P109 453 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 NENFQ9UMX5 172 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 PACSIN2Q9UNF0 486 aaPredicted RBP24.57■■□□□ 1.52
MCF2L-201ENST00000261963 ZBTB12Q9Y330 459 aaPredicted RBP24.57■■□□□ 1.52
MCF2L-201ENST00000261963 BZW2Q9Y6E2 419 aaKnown RBP24.57■■□□□ 1.52
MCF2L-201ENST00000261963 RBBP6Q7Z6E9 1792 aaKnown RBP24.57■■□□□ 1.52
MCF2L-201ENST00000261963 PSME4Q14997 1843 aa24.57■■□□□ 1.52
MCF2L-201ENST00000261963 CDR1P51861 262 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 ZNF131P52739 623 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 CEP85LQ5SZL2 805 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 WLSQ5T9L3 541 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 GJB7Q6PEY0 223 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 KSR1Q8IVT5 923 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 N4BP2L2Q92802 583 aaPredicted RBP24.56■■□□□ 1.52
MCF2L-201ENST00000261963 TMEM39BQ9GZU3 492 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 TMCO5BA8MYB1 307 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 PLA2G6O60733 806 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 SCP2P22307 547 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 DNA2P51530 1060 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 COG2Q14746 738 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 NFIL3Q16649 462 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 DNAAF5Q86Y56 855 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 CCT8L2Q96SF2 557 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 NAGPAQ9UK23 515 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 ODF2LQ9ULJ1 636 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 COL4A5P29400 1685 aa24.56■■□□□ 1.52
MCF2L-201ENST00000261963 GTPBP10A4D1E9 387 aaKnown RBP24.55■■□□□ 1.52
MCF2L-201ENST00000261963 DRP2Q13474 957 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 C10orf76Q5T2E6 689 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 C8orf74Q6P047 294 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 MIGA2Q7L4E1 593 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 NLRP14Q86W24 1093 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 LDHDQ86WU2 507 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 MIEF2Q96C03 454 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 FAM212AQ96EL1 285 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 INPP4AQ96PE3 977 aaPredicted RBP24.55■■□□□ 1.52
MCF2L-201ENST00000261963 ZNF577Q9BSK1 485 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 CENPHQ9H3R5 247 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 NR1D1P20393 614 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 SAMD1Q6SPF0 538 aaPredicted RBP24.55■■□□□ 1.52
MCF2L-201ENST00000261963 ZNF720Q7Z2F6 126 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 FAM186BQ8IYM0 893 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 MYCBPAPQ8TBZ2 947 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 CCDC43Q96MW1 224 aaKnown RBP24.55■■□□□ 1.52
MCF2L-201ENST00000261963 SLC40A1Q9NP59 571 aa24.55■■□□□ 1.52
MCF2L-201ENST00000261963 MUTP22033 750 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 IFT88Q13099 833 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 IQCKQ8N0W5 287 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 NACC1Q96RE7 527 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 PSMC2P35998 433 aaKnown RBP24.54■■□□□ 1.52
MCF2L-201ENST00000261963 FAM160B2Q86V87 743 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 WDR11Q9BZH6 1224 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 EHMT1Q9H9B1 1298 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 KIF13BQ9NQT8 1826 aa24.54■■□□□ 1.52
MCF2L-201ENST00000261963 ZNF233A6NK53 670 aa24.53■■□□□ 1.52
MCF2L-201ENST00000261963 TBC1D12O60347 775 aa24.53■■□□□ 1.52
MCF2L-201ENST00000261963 GLE1Q53GS7 698 aaKnown RBP24.53■■□□□ 1.52
MCF2L-201ENST00000261963 ALKBH5Q6P6C2 394 aaKnown RBP24.53■■□□□ 1.52
MCF2L-201ENST00000261963 IFT20Q8IY31 132 aa24.53■■□□□ 1.52
MCF2L-201ENST00000261963 SEL1LQ9UBV2 794 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms