RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 OPHN1O60890 802 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 MDH1BQ5I0G3 518 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 HIPK4Q8NE63 616 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 RMDN2Q96LZ7 410 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 AK8Q96MA6 479 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 SLITRK6Q9H5Y7 841 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 IL2RBP14784 551 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 CPA2P48052 419 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 KLC1Q07866 573 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 TTC8Q8TAM2 541 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 GPR101Q96P66 508 aaPredicted RBP17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 PJA2O43164 708 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 CASP4P49662 377 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 ADCY7P51828 1080 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 OVGP1Q12889 678 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 ABTB1Q969K4 478 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 RIC8AQ9NPQ8 531 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 TTC7AQ9ULT0 858 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 CFAP69A5D8W1 941 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 MARCKSL1P49006 195 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 RASSF2P50749 326 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 SLC30A10Q6XR72 485 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 FITM2Q8N6M3 262 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 DNAJC9Q8WXX5 260 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 ATG4AQ8WYN0 398 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 RAD54LQ92698 747 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 FGD4Q96M96 766 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 CCDC77Q9BR77 488 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 PCDHGC5Q9Y5F6 944 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 GOLGA8RI6L899 631 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 IFNB1P01574 187 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 PLA2G4BP0C869 781 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 CA4P22748 312 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 TNFRSF8P28908 595 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 C4orf32Q8N8J7 132 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 LRRC27Q9C0I9 530 aa17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 NKX1-2Q9UD57 310 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 ATXN2Q99700 1313 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-201ENST00000261897 PYGLP06737 847 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 KLRK1P26718 216 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 PDCD7Q8N8D1 485 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 B4GALNT2Q8NHY0 566 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 USP40Q9NVE5 1235 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 H0YGN5 161 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 RARAP10276 462 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 GHRP10912 638 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 RPL21P46778 160 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 SNAP25P60880 206 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 SFR1Q86XK3 245 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 EYA3Q99504 573 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 TTC1Q99614 292 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 THAP2Q9H0W7 228 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 NFS1Q9Y697 457 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 IRF6O14896 467 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 CYTH3O43739 400 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 RTN2O75298 545 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 CTTNQ14247 550 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 PRR16Q569H4 304 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 KAZNQ674X7 775 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 ZNF662Q6ZS27 426 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 ZNF365Q70YC5 407 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 MYCT1Q8N699 235 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 CFAP61Q8NHU2 1237 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 PIGBQ92521 554 aa17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 KLF6Q99612 283 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-201ENST00000261897 ETS2P15036 469 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 KCNA3P22001 575 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 TLDC1Q6P9B6 456 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 PCIF1Q9H4Z3 704 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 SLCO1B3Q9NPD5 702 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 RHBDL2Q9NX52 303 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 NOL4O94818 638 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 DRAP1Q14919 205 aaPredicted RBP17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 SGO2Q562F6 1265 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 TXLNGQ9NUQ3 528 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 DNAJC12Q9UKB3 198 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
PRPF40B-201ENST00000261897 A0A1B0GVG6 124 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 FAM13AO94988 1023 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 AGTP01019 485 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 LACTB2Q53H82 288 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 LRRC55Q6ZSA7 311 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 KRT35Q92764 455 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
PRPF40B-201ENST00000261897 DIP2BQ9P265 1576 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms