RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 SNX1Q13596 522 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 PWP2Q15269 919 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 SEL1L2Q5TEA6 688 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 MEX3CQ5U5Q3 659 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 NSMFQ6X4W1 530 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 ANKS4BQ8N8V4 417 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 ANKRD42Q8N9B4 389 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 SEC16BQ96JE7 1060 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 TAS2R14Q9NYV8 317 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 PITPNM2Q9BZ72 1349 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 FGFR4P22455 802 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 ABCB5Q2M3G0 1257 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 NT5DC3Q86UY8 548 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 UBL4BQ8N7F7 174 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 SCFD2Q8WU76 684 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 RFFLQ8WZ73 363 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 CCDC127Q96BQ5 260 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 KLC4Q9NSK0 619 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 SAMD15Q9P1V8 674 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 PCDHA2Q9Y5H9 948 aa17.52■□□□□ 0.39
SNCAIP-202ENST00000261368 K7ENM7 598 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 MMEP08473 750 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 FAM133BQ5BKY9 247 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 BARGINQ6ZT62 677 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 PPM1KQ8N3J5 372 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 MREGQ8N565 214 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 CERS5Q8N5B7 392 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 NEK9Q8TD19 979 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 ARHGEF26Q96DR7 871 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 CCDC17Q96LX7 622 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 SLITRK6Q9H5Y7 841 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 CNOT8Q9UFF9 292 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 GH2P01242 217 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 GCLMP48507 274 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 FMO5P49326 533 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 SYDE2Q5VT97 1194 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 ELAC2Q9BQ52 826 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 INTS2Q9H0H0 1204 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 INTS9Q9NV88 658 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 LRIG3Q6UXM1 1119 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 ARHGAP27Q6ZUM4 889 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 TMC3Q7Z5M5 1100 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 BANK1Q8NDB2 785 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 CALR3Q96L12 384 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 SUCLA2Q9P2R7 463 aaPredicted RBP17.51■□□□□ 0.39
SNCAIP-202ENST00000261368 GOLGA8IPA6NC78 632 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 GOLGA8JA6NMD2 632 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 FTLP02792 175 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 CLTAP09496 248 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 KCNJ1P48048 391 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 LRRC14Q15048 493 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 RINT1Q6NUQ1 792 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 LNX1Q8TBB1 728 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 TCP11Q8WWU5 503 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 PAIP2Q9BPZ3 127 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 KCNMB3Q9NPA1 279 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 TRAF3IP3Q9Y228 551 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 GSTTP1A0A1W2PQM5 241 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 SPATA31C1P0DKV0 1188 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 CRKP46108 304 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 PMS2P54278 862 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 AP3B2Q13367 1082 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 TRIP13Q15645 432 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 LRRC57Q8N9N7 239 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 FBXO25Q8TCJ0 367 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 ELMO3Q96BJ8 720 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 C18orf8Q96DM3 657 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 SLC40A1Q9NP59 571 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 KCNQ5Q9NR82 932 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 ASTN1O14525 1302 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 MEIS2O14770 477 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 NDUFB10O96000 172 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 SHBGP04278 402 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 BMP3P12645 472 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 NF2P35240 595 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 CALCOCO2Q13137 446 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 HIBCHQ6NVY1 386 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 KCNV1Q6PIU1 500 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 MYCBPQ99417 103 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 ASIC3Q9UHC3 531 aa17.5■□□□□ 0.39
SNCAIP-202ENST00000261368 CPP00450 1065 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 BCRP11274 1271 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CBWD6Q4V339 395 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CD302Q8IX05 232 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 SLC20A1Q8WUM9 679 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 DDTLA6NHG4 134 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 FOXN3O00409 490 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 ACSL3O95573 720 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 CHN1P15882 459 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 GABPAQ06546 454 aa17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 RBM26Q5T8P6 1007 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-202ENST00000261368 PALB2Q86YC2 1186 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms