RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 KLHL8Q9P2G9 620 aaPredicted RBP12.96□□□□□ -0.34
COL8A1-201ENST00000261037 SCINQ9Y6U3 715 aa12.96□□□□□ -0.34
COL8A1-201ENST00000261037 ALCAMQ13740 583 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 CASP8Q14790 479 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 UNC13DQ70J99 1090 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 TRAIPQ9BWF2 469 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 TTC7AQ9ULT0 858 aaPredicted RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 H7C1W4 665 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 CLDN3O15551 220 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 TJP3O95049 919 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 ZNF211Q13398 564 aaPredicted RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 STXBP2Q15833 593 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 THEM5Q8N1Q8 247 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 PRPF38AQ8NAV1 312 aaKnown RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 TXLNGQ9NUQ3 528 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 SLC8A2Q9UPR5 921 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 M0QYV0 167 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 MAP3K7O43318 606 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 PFKFB3Q16875 520 aaPredicted RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 PPP4R3CPQ6ZMV5 832 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 CNOT10Q9H9A5 744 aaKnown RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 GLI2P10070 1586 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 ESRRAP11474 423 aaPredicted RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 PRCPP42785 496 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 ARL6IP4Q66PJ3 421 aaKnown RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 ZNF302Q9NR11 478 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 PP2D1A8MPX8 630 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 PPFIA2O75334 1257 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 ADORA2BP29275 332 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 TWF2Q6IBS0 349 aaKnown RBP12.95□□□□□ -0.34
COL8A1-201ENST00000261037 AFG1LQ8WV93 481 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 NCLNQ969V3 563 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 SAAL1Q96ER3 474 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 FSD1LQ9BXM9 530 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 MINPP1Q9UNW1 487 aa12.95□□□□□ -0.34
COL8A1-201ENST00000261037 DENND3A2RUS2 1198 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 AP3B2Q13367 1082 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 TAF11Q15544 211 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 ZNF746Q6NUN9 644 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-201ENST00000261037 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 IFT43Q96FT9 208 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 CEP95Q96GE4 821 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 C11orf70Q9BRQ4 267 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 SARS2Q9NP81 518 aaKnown RBP12.94□□□□□ -0.34
COL8A1-201ENST00000261037 PCSK1NQ9UHG2 260 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 FEM1BQ9UK73 627 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 HSPA6P17066 643 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 NME3Q13232 169 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 SWSAP1Q6NVH7 229 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 PDIK1LQ8N165 341 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
COL8A1-201ENST00000261037 ELAC2Q9BQ52 826 aaKnown RBP12.94□□□□□ -0.34
COL8A1-201ENST00000261037 KLC2Q9H0B6 622 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 MLXIPLQ9NP71 852 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 CEP72Q9P209 647 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 UBE4BO95155 1302 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
COL8A1-201ENST00000261037 RASSF3Q86WH2 238 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 MMTAG2Q9BU76 263 aaKnown RBP12.94□□□□□ -0.34
COL8A1-201ENST00000261037 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 STK25O00506 426 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 ESRRBO95718 433 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 CHEK2O96017 543 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 CIITAP33076 1130 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 DRP2Q13474 957 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 ATG16L1Q676U5 607 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
COL8A1-201ENST00000261037 TMPRSS15P98073 1019 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 POLR3FQ9H1D9 316 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 CDC27P30260 824 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 CYFIP1Q7L576 1253 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 CELF1Q92879 486 aaKnown RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 EDEM3Q9BZQ6 932 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 FAM8A1Q9UBU6 413 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 PNMA3Q9UL41 463 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 CPDO75976 1380 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 ADGRB3O60242 1522 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 ARHGEF37A1IGU5 675 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 SYNDIG1LA6NDD5 238 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 PIK3R2O00459 728 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 COPEO14579 308 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 GPSM2P81274 684 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 TAF1BQ53T94 588 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 C6orf118Q5T5N4 469 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 RNF219Q5W0B1 726 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 RHOT2Q8IXI1 618 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 GABBR1Q9UBS5 961 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 PACSIN2Q9UNF0 486 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 NPHP3-ACAD11A0A0J9YXS1 232 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms