RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 RAD9BQ6WBX8 426 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 SEPT1Q8WYJ6 367 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 DNAJC7Q99615 494 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 KIFC3Q9BVG8 833 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 LOC102724159A0A0B4J2E5 919 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 EPB41P11171 864 aaKnown RBP24.55■■□□□ 1.52
SIX3-201ENST00000260653 NPTX2P47972 431 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 PWP2Q15269 919 aaKnown RBP24.55■■□□□ 1.52
SIX3-201ENST00000260653 FAM110CQ1W6H9 321 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 HSDL1Q3SXM5 330 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 CELF3Q5SZQ8 465 aaKnown RBP24.55■■□□□ 1.52
SIX3-201ENST00000260653 KIFAP3Q92845 792 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 COPS5Q92905 334 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 MMRN2Q9H8L6 949 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 ATP6V0A4Q9HBG4 840 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 CCDC169A6NNP5 214 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 GTF2BQ00403 316 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 DMP1Q13316 513 aaPredicted RBP24.54■■□□□ 1.52
SIX3-201ENST00000260653 GPR142Q7Z601 462 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 MCPH1Q8NEM0 835 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 OR8K1Q8NGG5 319 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 DESI2Q9BSY9 194 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 ST6GALNAC4Q9H4F1 302 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 FAM184BQ9ULE4 1060 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 TISP43B9A030 160 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 CYP2J2P51589 502 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 KCNMA1Q12791 1236 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 KCNH2Q12809 1159 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 FIGNQ5HY92 759 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 NYAP1Q6ZVC0 841 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 ABRAQ8N0Z2 381 aa24.54■■□□□ 1.52
SIX3-201ENST00000260653 STRNO43815 780 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 TXNP10599 105 aaKnown RBP24.53■■□□□ 1.52
SIX3-201ENST00000260653 STAT5BP51692 787 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 ACCSQ96QU6 501 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 GPR20Q99678 358 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 IGF2BP3O00425 579 aaKnown RBP eCLIP24.53■■□□□ 1.52
SIX3-201ENST00000260653 EMC2Q15006 297 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 DCAF17Q5H9S7 520 aaPredicted RBP24.53■■□□□ 1.52
SIX3-201ENST00000260653 SAPCD2Q86UD0 394 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 TMEM161BQ8NDZ6 487 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 TMEM206Q9H813 350 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 DMAC2Q9NW81 257 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 PPP2R2CQ9Y2T4 447 aa24.53■■□□□ 1.52
SIX3-201ENST00000260653 R3HCC1Q9Y3T6 440 aaKnown RBP24.53■■□□□ 1.52
SIX3-201ENST00000260653 XRCC5P13010 732 aaKnown RBP24.52■■□□□ 1.52
SIX3-201ENST00000260653 TNNT1P13805 278 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 POLGP54098 1239 aaPredicted RBP24.52■■□□□ 1.52
SIX3-201ENST00000260653 FAM160B1Q5W0V3 765 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 TRIM50Q86XT4 487 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 GOLGA5Q8TBA6 731 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 AFAP1L1Q8TED9 768 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 CRACR2AQ9BSW2 395 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 METTL14Q9HCE5 456 aaKnown RBP24.52■■□□□ 1.52
SIX3-201ENST00000260653 A0A1W2PQJ5 194 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 NOP56O00567 594 aaKnown RBP24.52■■□□□ 1.52
SIX3-201ENST00000260653 BRD2P25440 801 aaKnown RBP24.52■■□□□ 1.52
SIX3-201ENST00000260653 SMTNP53814 917 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 PTPN14Q15678 1187 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 FAM186BQ8IYM0 893 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 BORCS6Q96GS4 357 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 CPA4Q9UI42 421 aa24.52■■□□□ 1.52
SIX3-201ENST00000260653 DCAF8L1A6NGE4 600 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 PSMC2P35998 433 aaKnown RBP24.51■■□□□ 1.51
SIX3-201ENST00000260653 ZBED6P86452 979 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 TTLL4Q14679 1199 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 SCFD2Q8WU76 684 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 SPATA33Q96N06 139 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 POLR3FQ9H1D9 316 aaPredicted RBP24.51■■□□□ 1.51
SIX3-201ENST00000260653 KMT5AQ9NQR1 393 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 ADGRA3Q8IWK6 1321 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 GRB14Q14449 540 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 TCERG1LQ5VWI1 586 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 WDR59Q6PJI9 974 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 CYP26C1Q6V0L0 522 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 TMTC1Q8IUR5 882 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 SLC17A8Q8NDX2 589 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 SLC35C1Q96A29 364 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 CEP89Q96ST8 783 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 CHP1Q99653 195 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 NIFKQ9BYG3 293 aaKnown RBP24.51■■□□□ 1.51
SIX3-201ENST00000260653 AZI2Q9H6S1 392 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 C17orf75Q9HAS0 396 aa24.51■■□□□ 1.51
SIX3-201ENST00000260653 REXO1L1PQ8IX06 675 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 SPIRE2Q8WWL2 714 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 DHX33Q9H6R0 707 aaKnown RBP24.5■■□□□ 1.51
SIX3-201ENST00000260653 ECM2O94769 699 aaPredicted RBP24.5■■□□□ 1.51
SIX3-201ENST00000260653 MARK3P27448 753 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 DPP9Q86TI2 863 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 GLG1Q92896 1179 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 TMEM143Q96AN5 459 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 IQCDQ96DY2 449 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 NTPCRQ9BSD7 190 aaKnown RBP24.5■■□□□ 1.51
SIX3-201ENST00000260653 MKNK1Q9BUB5 465 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 TBX20Q9UMR3 447 aa24.5■■□□□ 1.51
SIX3-201ENST00000260653 DENND3A2RUS2 1198 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 CCP110O43303 1012 aa24.49■■□□□ 1.51
SIX3-201ENST00000260653 AFPP02771 609 aaKnown RBP24.49■■□□□ 1.51
SIX3-201ENST00000260653 GJC2Q5T442 439 aaPredicted RBP24.49■■□□□ 1.51
SIX3-201ENST00000260653 RGMBQ6NW40 437 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms