RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RETREG2Q8NC44 543 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 PAWRQ96IZ0 340 aaKnown RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 POLR3FQ9H1D9 316 aaPredicted RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 TRMT13Q9NUP7 481 aaKnown RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 PANK4Q9NVE7 773 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 KIAA1468Q9P260 1216 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 PCDHA2Q9Y5H9 948 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 PVALEFA0A1B0GWK0 134 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 TBCAO75347 108 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 CYP2C9P11712 490 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 ARL2P36404 184 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 CDK7P50613 346 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 NT5DC1Q5TFE4 455 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 KIFAP3Q92845 792 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 SMARCE1Q969G3 411 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 DRC1Q96MC2 740 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 ZHX3Q9H4I2 956 aa17.51■□□□□ 0.39
CCDC90B-201ENST00000260054 SMIM35A0A1B0GVV1 85 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 FAM13AO94988 1023 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 SMC2O95347 1197 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 ATN1P54259 1190 aaPredicted RBP17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 EHHADHQ08426 723 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 COASYQ13057 564 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 PTGISQ16647 500 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 KMT5BQ4FZB7 885 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 IER5Q5VY09 327 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 SLC39A5Q6ZMH5 540 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 CCDC65Q8IXS2 484 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 KIAA0319LQ8IZA0 1049 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 ASAP3Q8TDY4 903 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 BSNDQ8WZ55 320 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 GSDMAQ96QA5 445 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 C11orf49Q9H6J7 331 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 PARVGQ9HBI0 331 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 EVPLQ92817 2033 aa17.5■□□□□ 0.39
CCDC90B-201ENST00000260054 B4GALT4O60513 344 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 GLRA2P23416 452 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 TMOD1P28289 359 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 SERINC5Q86VE9 423 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 SFR1Q86XK3 245 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 TCP11Q8WWU5 503 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 PRPF31Q8WWY3 499 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 WNT8BQ93098 351 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 HPS3Q969F9 1004 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 SEZ6LQ9BYH1 1024 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 FAM49AQ9H0Q0 323 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 TRPV6Q9H1D0 765 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 SUCLA2Q9P2R7 463 aaPredicted RBP17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 COL4A3BPQ9Y5P4 624 aa17.49■□□□□ 0.39
CCDC90B-201ENST00000260054 RHOBTB3O94955 611 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 PLS3P13797 630 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 DNM2P50570 870 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 KCNB1Q14721 858 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 HERC4Q5GLZ8 1057 aaPredicted RBP17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 MYCT1Q8N699 235 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 ABHD8Q96I13 439 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 FIZ1Q96SL8 496 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 EXOC1Q9NV70 894 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 BIN1O00499 593 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 VTNP04004 478 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 GAP43P17677 238 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 PEX3P56589 373 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 RTP1P59025 263 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 SNX17Q15036 470 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 ZSCAN23Q3MJ62 389 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 ODR4Q5SWX8 454 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 ISM2Q6H9L7 571 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 TAF2Q6P1X5 1199 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 NECAB2Q7Z6G3 386 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 UBE2Q1Q7Z7E8 422 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 KSR1Q8IVT5 923 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 FAM126BQ8IXS8 530 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 DNAJB3Q8WWF6 145 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 FGFBP2Q9BYJ0 223 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 TBC1D7Q9P0N9 293 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 AKT3Q9Y243 479 aa17.48■□□□□ 0.39
CCDC90B-201ENST00000260054 LAMTOR4Q0VGL1 99 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 CAPSQ13938 189 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 C1orf53Q5VUE5 145 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 RHPN2Q8IUC4 686 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 DHX38Q92620 1227 aaKnown RBP17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 ZNF668Q96K58 619 aaPredicted RBP17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 MAP7D2Q96T17 732 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 PPP1R16BQ96T49 567 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 C17orf75Q9HAS0 396 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 OLFML3Q9NRN5 406 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 NOD1Q9Y239 953 aa17.47■□□□□ 0.39
CCDC90B-201ENST00000260054 MYH11P35749 1972 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 ADGRA3Q8IWK6 1321 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 SYCE3A1L190 88 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 PQBP1O60828 265 aaKnown RBP17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 BMP6P22004 513 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 NPTX2P47972 431 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 STK4Q13043 487 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 PTK7Q13308 1070 aa17.46■□□□□ 0.39
CCDC90B-201ENST00000260054 DMP1Q13316 513 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms