RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 FOXN1O15353 648 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 ABCF3Q9NUQ8 709 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 ATP8B3O60423 1300 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 KIF28PB7ZC32 967 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 ZNF394Q53GI3 561 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 PADI6Q6TGC4 694 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 CRLF3Q8IUI8 442 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 NBPF3Q9H094 633 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
ALPK3-201ENST00000258888 KCNH2Q12809 1159 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 FAM83BQ5T0W9 1011 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 FAM160B2Q86V87 743 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 WDR24Q96S15 920 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 TUBB6Q9BUF5 446 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 TXNRD1Q16881 649 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 TMEM270Q6UE05 265 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 CLTCL1P53675 1640 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 NCAPD2Q15021 1401 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 HSPA4LO95757 839 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 OCRLQ01968 901 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 EXOC8Q8IYI6 725 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 KRT37O76014 449 aa14.39□□□□□ -0.11
ALPK3-201ENST00000258888 ABTB1Q969K4 478 aaPredicted RBP14.39□□□□□ -0.11
ALPK3-201ENST00000258888 PRDX5P30044 214 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 DDX47Q9H0S4 455 aaKnown RBP14.38□□□□□ -0.11
ALPK3-201ENST00000258888 ZBBXA8MT70 800 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 PI4K2BG5E9Z4 385 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 SMYD3Q9H7B4 428 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 SLC12A6Q9UHW9 1150 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 SYT2Q8N9I0 419 aaPredicted RBP14.38□□□□□ -0.11
ALPK3-201ENST00000258888 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 CCDC138Q96M89 665 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 MIF4GDA9UHW6 222 aaKnown RBP14.38□□□□□ -0.11
ALPK3-201ENST00000258888 COPEO14579 308 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 OSBPP22059 807 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 ANO9A1A5B4 782 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 FAM196BA6NMK8 535 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 USP17L10C9JJH3 530 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 SLC16A4O15374 487 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 YWHAHQ04917 246 aaPredicted RBP14.38□□□□□ -0.11
ALPK3-201ENST00000258888 AP3B2Q13367 1082 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 NKX1-1Q15270 411 aaPredicted RBP14.38□□□□□ -0.11
ALPK3-201ENST00000258888 TMEM179Q6ZVK1 233 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 KLC2Q9H0B6 622 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 CROCC2H7BZ55 1655 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 SLFN12LQ6IEE8 588 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 ATICP31939 592 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 PRELPP51888 382 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 JAK3P52333 1124 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 TAF1BQ53T94 588 aaPredicted RBP14.38□□□□□ -0.11
ALPK3-201ENST00000258888 ZNF667Q5HYK9 610 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 XXYLT1Q8NBI6 393 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 C11orf70Q9BRQ4 267 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 WDR19Q8NEZ3 1342 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 F5H423 210 aaPredicted RBP14.38□□□□□ -0.11
ALPK3-201ENST00000258888 CYP27B1O15528 508 aa14.38□□□□□ -0.11
ALPK3-201ENST00000258888 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 LRRC7Q96NW7 1537 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 SPHKAPQ2M3C7 1700 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 DCTN3O75935 186 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 STAT3P40763 770 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 SURF1Q15526 300 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 MMS22LQ6ZRQ5 1243 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ZCCHC17Q9NP64 241 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ADGRG1Q9Y653 693 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 EPM2AIP1Q7L775 607 aaPredicted RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ARL13BQ3SXY8 428 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 SERPINI1Q99574 410 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ARHGAP31Q2M1Z3 1444 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 WDR64B1ANS9 1081 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 GRM4Q14833 912 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 HABP4Q5JVS0 413 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 TRIM55Q9BYV6 548 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 NOP53Q9NZM5 478 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ZFP69BQ9UJL9 534 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 PCDHA6Q9UN73 950 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 PCDHA8Q9Y5H6 950 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 FOXD4Q12950 439 aaPredicted RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 IPO5O00410 1097 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 PODXLO00592 558 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ZNF699Q32M78 642 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 RNF139Q8WU17 664 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 MTMR1Q13613 665 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 SMAD1Q15797 465 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 SUPT20HL1Q3ZLR7 823 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 RBM41Q96IZ5 413 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 DCP1AQ9NPI6 582 aaPredicted RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 HEY1Q9Y5J3 304 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 NPR1P16066 1061 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ANXA13P27216 316 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 RMDN3Q96TC7 470 aa14.37□□□□□ -0.11
ALPK3-201ENST00000258888 DIS3Q9Y2L1 958 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 NOC2LQ9Y3T9 749 aaKnown RBP14.37□□□□□ -0.11
ALPK3-201ENST00000258888 SPAG7O75391 227 aa14.36□□□□□ -0.11
ALPK3-201ENST00000258888 MAGEA9P43362 315 aa14.36□□□□□ -0.11
ALPK3-201ENST00000258888 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
ALPK3-201ENST00000258888 MKRN3Q13064 507 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms