RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 NR3C2P08235 984 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 SLC7A5Q01650 507 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 MCTP2Q6DN12 878 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 SCYL3Q8IZE3 742 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 COG1Q8WTW3 980 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 PDCD2LQ9BRP1 358 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 PITPNM2Q9BZ72 1349 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 RNF181Q9P0P0 153 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 AJAP1Q9UKB5 411 aaPredicted RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 EIF3CLB5ME19 914 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 RNF40O75150 1001 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 TACC1O75410 805 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 QARSP47897 775 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 DLG4P78352 724 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 LRRC31Q6UY01 552 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 LPAR1Q92633 364 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 BICD1Q96G01 975 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 EIF3CQ99613 913 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 PSD3Q9NYI0 1048 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 PGAP2Q9UHJ9 254 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 UCHL3P15374 230 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 MEA1Q16626 185 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 LMBRD2Q68DH5 695 aaPredicted RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 CEP63Q96MT8 703 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 POP1Q99575 1024 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 ELP3Q9H9T3 547 aa15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 AGO4Q9HCK5 861 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 SEPT9Q9UHD8 586 aaPredicted RBP15.97■□□□□ 0.15
TRAFD1-201ENST00000257604 P4HBP07237 508 aaKnown RBP15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 DLATP10515 647 aaKnown RBP15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 PTK2Q05397 1052 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 PPP2R5CQ13362 524 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 TMEM132BQ14DG7 1078 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 MTERF2Q49AM1 385 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 ZNF720Q7Z2F6 126 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 U2AF1L4Q8WU68 220 aaKnown RBP15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 TUFT1Q9NNX1 390 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 CCNE2O96020 404 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 MYBL2P10244 700 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 SETQ01105 290 aaPredicted RBP15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 ZBED3Q96IU2 234 aaPredicted RBP15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 ACP6Q9NPH0 428 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 LARSQ9P2J5 1176 aaKnown RBP15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 DNAH12Q6ZR08 3092 aa15.96■□□□□ 0.15
TRAFD1-201ENST00000257604 POTEB2H3BUK9 544 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 GNA14O95837 355 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 PON1P27169 355 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 CBWD6Q4V339 395 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 CBWD3Q5JTY5 395 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 CBWD5Q5RIA9 395 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 GBP6Q6ZN66 633 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 PACS2Q86VP3 889 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 CCDC170Q8IYT3 715 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 MTMR14Q8NCE2 650 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 PXMP2Q9NR77 195 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 CEP72Q9P209 647 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 TNS1Q9HBL0 1735 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 PDXKO00764 312 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 KLRC1P26715 233 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 PSMC2P35998 433 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 TREML2Q5T2D2 321 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 GOLGA6L1Q8N7Z2 621 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 CLMNQ96JQ2 1002 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 AGPAT3Q9NRZ7 376 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 PDE2AO00408 941 aaPredicted RBP15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 MARK3P27448 753 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 RARRES1P49788 294 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 USP14P54578 494 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 ZNF746Q6NUN9 644 aaPredicted RBP15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 ADAT2Q7Z6V5 191 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 DAW1Q8N136 415 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 SLC35C1Q96A29 364 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 R3HDMLQ9H3Y0 253 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 AS3MTQ9HBK9 375 aa15.95■□□□□ 0.14
TRAFD1-201ENST00000257604 CALCAP01258 141 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 HSD17B4P51659 736 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 PHLDB2Q86SQ0 1253 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 ALS2CR12Q96Q35 445 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 QSER1Q2KHR3 1735 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 PALMO75781 387 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 IVLP07476 585 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 WHAMMP3Q1A5X7 153 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 HAUS6Q7Z4H7 955 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 SULF1Q8IWU6 871 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 MICALL1Q8N3F8 863 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 GPRC5DQ9NZD1 345 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 ARFGEF1Q9Y6D6 1849 aa15.94■□□□□ 0.14
TRAFD1-201ENST00000257604 TMEM110-MUSTN1A8MSY1 372 aa15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 LIG3P49916 1009 aa15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 FAM71BQ8TC56 605 aa15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 PPP1R16BQ96T49 567 aa15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 FHDC1Q9C0D6 1143 aaPredicted RBP15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 DHX15O43143 795 aaKnown RBP15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 PGK2P07205 417 aa15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 KRT13P13646 458 aa15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 GAP43P17677 238 aa15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
TRAFD1-201ENST00000257604 MAP2K1Q02750 393 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms