RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ATP2C1P98194 919 aaPredicted RBP20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 PDIA5Q14554 519 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 POTEGQ6S5H5 508 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 DTHD1Q6ZMT9 781 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 EXOC8Q8IYI6 725 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 IGSF22Q8N9C0 903 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 PRPF31Q8WWY3 499 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 NLRP4Q96MN2 994 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 XPNPEP1Q9NQW7 623 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 STXBP5LQ9Y2K9 1186 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 INSL6Q9Y581 213 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 A0A087WZ62 844 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 PP2D1A8MPX8 630 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 IBSPP21815 317 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 CCT6AP40227 531 aaKnown RBP20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 PRPHP41219 470 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 HTRA4P83105 476 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 CDC42EP1Q00587 391 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 ECM1Q16610 540 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 ODR4Q5SWX8 454 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 CCDC43Q96MW1 224 aaKnown RBP20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 NACC1Q96RE7 527 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 YME1L1Q96TA2 773 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 ADAM2Q99965 735 aa20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 FDXACB1Q9BRP7 624 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 GCOM2Q9BZD3 368 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-201ENST00000254193 DENND3A2RUS2 1198 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 CDC25AP30304 524 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 RESTQ13127 1097 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 PSPC1Q8WXF1 523 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 ARNTL2Q8WYA1 636 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 MTRQ99707 1265 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 RAB34Q9BZG1 259 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 MTMR6Q9Y217 621 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 COL4A3BPQ9Y5P4 624 aa20.02■□□□□ 0.8
SNRPA1-201ENST00000254193 LINC01553A4QN01 128 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 RFXAPO00287 272 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 DGAT1O75907 488 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 SRGAP2CP0DJJ0 459 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 FOSL2P15408 326 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 LAMTOR4Q0VGL1 99 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 HAUS3Q68CZ6 603 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 ZNF410Q86VK4 478 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 SNX29Q8TEQ0 813 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 TCP11Q8WWU5 503 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 ATP6V0A4Q9HBG4 840 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 DBR1Q9UK59 544 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 MTUS1Q9ULD2 1270 aa20.01■□□□□ 0.79
SNRPA1-201ENST00000254193 VWA3AA6NCI4 1184 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 EPOPA6NHQ4 379 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 GAS2O43903 313 aaKnown RBP20■□□□□ 0.79
SNRPA1-201ENST00000254193 USO1O60763 962 aaKnown RBP20■□□□□ 0.79
SNRPA1-201ENST00000254193 HSP90AA1P07900 732 aaKnown RBP20■□□□□ 0.79
SNRPA1-201ENST00000254193 ADGRE1Q14246 886 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 DSC3Q14574 896 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 FAM173BQ6P4H8 233 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 CRIPAKQ8N1N5 446 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 SP7Q8TDD2 431 aaPredicted RBP20■□□□□ 0.79
SNRPA1-201ENST00000254193 IFT122Q9HBG6 1241 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 RGS18Q9NS28 235 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 KIAA1024Q9UPX6 916 aa20■□□□□ 0.79
SNRPA1-201ENST00000254193 MYH9P35579 1960 aaKnown RBP20■□□□□ 0.79
SNRPA1-201ENST00000254193 STX6O43752 255 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 SARSP49591 514 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 SF3A1Q15459 793 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 KRT79Q5XKE5 535 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 SLC24A5Q71RS6 500 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 MAEAQ7L5Y9 396 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 NPAS4Q8IUM7 802 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 RNF149Q8NC42 400 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 ASAP3Q8TDY4 903 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 MMTAG2Q9BU76 263 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 C1orf112Q9NSG2 853 aa19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 DDX19AQ9NUU7 478 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-201ENST00000254193 ARHGEF35A5YM69 484 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 C9IYK1 514 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 ASAP2O43150 1006 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 DGKIO75912 1065 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 MUTP22033 750 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 ARL2P36404 184 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 ARL6IP4Q66PJ3 421 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 PADI6Q6TGC4 694 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 FAM43BQ6ZT52 329 aaPredicted RBP19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 TGS1Q96RS0 853 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 GAS2L1Q99501 681 aaPredicted RBP19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 C17orf80Q9BSJ5 609 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 INO80BQ9C086 356 aaPredicted RBP19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 MINDY3Q9H8M7 445 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 GPRC5CQ9NQ84 441 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 LRFN2Q9ULH4 789 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 PCDHB7Q9Y5E2 793 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 CLIC4Q9Y696 253 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 STK24Q9Y6E0 443 aa19.98■□□□□ 0.79
SNRPA1-201ENST00000254193 SIP14410 1827 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 BMP15O95972 392 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 STAG3L1P0CL83 205 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 ZSCAN20P17040 1043 aaPredicted RBP19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 IGFBP4P22692 258 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms