RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TAF12Q16514 161 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 MFN1Q8IWA4 741 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 FAM81BQ96LP2 452 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 ABCA9Q8IUA7 1624 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 M0R3G1 203 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 ZRANB2O95218 330 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 KRT1P04264 644 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 PRPSAP1Q14558 356 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 HDDC2Q7Z4H3 204 aa14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 PRPF18Q99633 342 aaKnown RBP14.05□□□□□ -0.16
PCDHGA3-201ENST00000253812 CAND2O75155 1236 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 IL6STP40189 918 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 KLC3Q6P597 504 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 GRAMD1CQ8IYS0 662 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 ZNF710Q8N1W2 664 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 OMA1Q96E52 524 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 A6NJR5 290 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 H0YIN7 160 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 GFPT2O94808 682 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 FAM200BP0CF97 657 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 AARSP49588 968 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 E4F1Q66K89 784 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 TMC5Q6UXY8 1006 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 MAPKAPK5Q8IW41 473 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 PIGBQ92521 554 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 LARP4BQ92615 738 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 KCNF1Q9H3M0 494 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 LGALS16A8MUM7 142 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 IGF2BP3O00425 579 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 STRNO43815 780 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 SRGAP2BP0DMP2 458 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 HLA-DPA1P20036 260 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 PSMC2P35998 433 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 LRRC36Q1X8D7 754 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 ZC3H12BQ5HYM0 836 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 AGBL2Q5U5Z8 902 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 KRT39Q6A163 491 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 ARMCX5Q6P1M9 558 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 PLD3Q8IV08 490 aa14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 DDX47Q9H0S4 455 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-201ENST00000253812 CHRNA3P32297 505 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 PTGISQ16647 500 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 NFRKBQ6P4R8 1299 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 DNAAF3Q8N9W5 541 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 CCDC127Q96BQ5 260 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 ERP27Q96DN0 273 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 KCNK16Q96T55 309 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 KLC2Q9H0B6 622 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 GGT7Q9UJ14 662 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 RSPH10B2B2RC85 870 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 RSPH10BP0C881 870 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 PAX7P23759 505 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 ADORA1P30542 326 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 PLA2G4AP47712 749 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 SLC12A1Q13621 1099 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 LRRC31Q6UY01 552 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 FLCNQ8NFG4 579 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 RIN2Q8WYP3 895 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 RMI1Q9H9A7 625 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 KIF19Q2TAC6 998 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 CATSPER3Q86XQ3 398 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 EME1Q96AY2 570 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 HDAC6Q9UBN7 1215 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 HESX1Q9UBX0 185 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 PDE8BO95263 885 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 SEC24CP53992 1094 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 LRRC63Q05C16 580 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 SLFN12Q8IYM2 578 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 ZMYND8Q9ULU4 1186 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 AP4S1Q9Y587 144 aa14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 SRPRBQ9Y5M8 271 aaKnown RBP14.03□□□□□ -0.16
PCDHGA3-201ENST00000253812 CHN1P15882 459 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 PHKA1P46020 1223 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 KRR1Q13601 381 aaKnown RBP14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 DARS2Q6PI48 645 aaKnown RBP14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 PRMT1Q99873 361 aaKnown RBP14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 VCPKMTQ9H867 229 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 H0YCG3 227 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 TMOD1P28289 359 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 NUP107P57740 925 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 PRAMEP78395 509 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 CHRNDQ07001 517 aa14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 EFTUD2Q15029 972 aaKnown RBP eCLIP14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 TAF1BQ53T94 588 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 QTRT2Q9H974 415 aaKnown RBP14.02□□□□□ -0.16
PCDHGA3-201ENST00000253812 BTKQ06187 659 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 POTEAQ6S8J7 498 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 MYLK4Q86YV6 388 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 KIF2BQ8N4N8 673 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 TGFBRAP1Q8WUH2 860 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 TRIM63Q969Q1 353 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 PBXIP1Q96AQ6 731 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 LRRC1Q9BTT6 524 aa14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 BIN2Q9UBW5 565 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA3-201ENST00000253812 SMG5Q9UPR3 1016 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms