RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 HEXIM1O94992 359 aaKnown RBP18.38■□□□□ 0.53
ACTN4-201ENST00000252699 ATF2P15336 505 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 GFPT1Q06210 699 aaPredicted RBP18.38■□□□□ 0.53
ACTN4-201ENST00000252699 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 CTAGE3PQ8IX95 158 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 RHOT2Q8IXI1 618 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 PBKQ96KB5 322 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 AGO2Q9UKV8 859 aaKnown RBP18.38■□□□□ 0.53
ACTN4-201ENST00000252699 H7C0C1 242 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 MSH4O15457 936 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 ATP5OP48047 213 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 BACE1P56817 501 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 MXRA7P84157 204 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 PDZD4Q76G19 769 aaPredicted RBP18.38■□□□□ 0.53
ACTN4-201ENST00000252699 IDI2Q9BXS1 227 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 SPDYE2Q495Y8 402 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 RSRC2Q7L4I2 434 aaKnown RBP18.37■□□□□ 0.53
ACTN4-201ENST00000252699 CATSPER3Q86XQ3 398 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 CHST13Q8NET6 341 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 TIPINQ9BVW5 301 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 LRRC4Q9HBW1 653 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 MAFGO15525 162 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 SLC25A27O95847 323 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 LGSNQ5TDP6 509 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 TWF2Q6IBS0 349 aaKnown RBP18.37■□□□□ 0.53
ACTN4-201ENST00000252699 TMEM270Q6UE05 265 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 GMCL1P1Q8NEA9 526 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 UHMK1Q8TAS1 419 aaKnown RBP18.37■□□□□ 0.53
ACTN4-201ENST00000252699 FBF1Q8TES7 1133 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 FAM217BQ9NTX9 383 aaPredicted RBP18.37■□□□□ 0.53
ACTN4-201ENST00000252699 LRFN2Q9ULH4 789 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 DAAM1Q9Y4D1 1078 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 DISP2A7MBM2 1401 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 SMIM22K7EJ46 135 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 RGS16O15492 202 aaPredicted RBP18.37■□□□□ 0.53
ACTN4-201ENST00000252699 LPXNO60711 386 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 MMP14P50281 582 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 MRPS9P82933 396 aaKnown RBP18.37■□□□□ 0.53
ACTN4-201ENST00000252699 ZNF699Q32M78 642 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 NME8Q8N427 588 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 TRIM7Q9C029 511 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 EPB41L5Q9HCM4 733 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 PLCB1Q9NQ66 1216 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 RBAKQ9NYW8 714 aaPredicted RBP18.37■□□□□ 0.53
ACTN4-201ENST00000252699 RASGRP2Q7LDG7 609 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 ERICH1Q86X53 443 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 PALM2Q8IXS6 379 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 RABEP2Q9H5N1 569 aa18.37■□□□□ 0.53
ACTN4-201ENST00000252699 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 WNT10BO00744 389 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 C2orf54Q08AI8 447 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 SGO2Q562F6 1265 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 PLA2G4FQ68DD2 849 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 XRRA1Q6P2D8 792 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 PNMA8AQ86V59 439 aaPredicted RBP18.36■□□□□ 0.53
ACTN4-201ENST00000252699 GPD1LQ8N335 351 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 KCND2Q9NZV8 630 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 ADAM22Q9P0K1 906 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 CCL15-CCL14A0A0B4J2E2 113 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 CCL15Q16663 113 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 C6orf163Q5TEZ5 329 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
ACTN4-201ENST00000252699 CAPN11Q9UMQ6 739 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 PFASO15067 1338 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 RFX6Q8HWS3 928 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
ACTN4-201ENST00000252699 A6NNZ2 444 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 ALDH3A1P30838 453 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 EFNA5P52803 228 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 TUBB8Q3ZCM7 444 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 GABPB2Q8TAK5 448 aaPredicted RBP18.35■□□□□ 0.53
ACTN4-201ENST00000252699 IFT122Q9HBG6 1241 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 HPSEQ9Y251 543 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 MYBP10242 640 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 GPC3P51654 580 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 SARNPP82979 210 aaKnown RBP18.35■□□□□ 0.53
ACTN4-201ENST00000252699 ELOA2Q8IYF1 753 aaPredicted RBP18.35■□□□□ 0.53
ACTN4-201ENST00000252699 KRT1P04264 644 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 RHBDL3P58872 404 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 SNX1Q13596 522 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 CAPN12Q6ZSI9 719 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
ACTN4-201ENST00000252699 MOV10L1Q9BXT6 1211 aaKnown RBP18.35■□□□□ 0.53
ACTN4-201ENST00000252699 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
ACTN4-201ENST00000252699 PITPNM2Q9BZ72 1349 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 ZNF157P51786 506 aaPredicted RBP18.35■□□□□ 0.53
ACTN4-201ENST00000252699 RINT1Q6NUQ1 792 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 TMEM35BQ8NCS4 154 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 CALN1Q9BXU9 219 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 GAKO14976 1311 aa18.35■□□□□ 0.53
ACTN4-201ENST00000252699 LRRD1A4D1F6 860 aa18.34■□□□□ 0.53
ACTN4-201ENST00000252699 USP27XA6NNY8 438 aa18.34■□□□□ 0.53
ACTN4-201ENST00000252699 PALMO75781 387 aa18.34■□□□□ 0.53
ACTN4-201ENST00000252699 NPEPPSP55786 919 aa18.34■□□□□ 0.53
ACTN4-201ENST00000252699 PRKCEQ02156 737 aa18.34■□□□□ 0.53
ACTN4-201ENST00000252699 LMNB2Q03252 620 aa18.34■□□□□ 0.53
ACTN4-201ENST00000252699 DSTYKQ6XUX3 929 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms