RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TARBP2Q15633 366 aaKnown RBP23.71■■□□□ 1.39
NEDD8-201ENST00000250495 CLUL1Q15846 466 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 KRT25Q7Z3Z0 450 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 EFHBQ8N7U6 833 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 TMEM117Q9H0C3 514 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 C19orf67A6NJJ6 358 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 TBX10O75333 385 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 NEFLP07196 543 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 FGFR1P11362 822 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 DARSP14868 501 aaKnown RBP23.7■■□□□ 1.38
NEDD8-201ENST00000250495 B3GNT9Q6UX72 402 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 THNSL1Q8IYQ7 743 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 SCLT1Q96NL6 688 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 AIFM3Q96NN9 605 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 POP1Q99575 1024 aaKnown RBP23.7■■□□□ 1.38
NEDD8-201ENST00000250495 C11orf16Q9NQ32 467 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 SEPT9Q9UHD8 586 aaPredicted RBP23.7■■□□□ 1.38
NEDD8-201ENST00000250495 HCN4Q9Y3Q4 1203 aa23.7■■□□□ 1.38
NEDD8-201ENST00000250495 FGF18O76093 207 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 XBP1P17861 261 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 LAG3P18627 525 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 NRIP1P48552 1158 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 DNM2P50570 870 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 NPY5RQ15761 445 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 PDE12Q6L8Q7 609 aaKnown RBP23.69■■□□□ 1.38
NEDD8-201ENST00000250495 ADGRD2Q7Z7M1 963 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 RBM23Q86U06 439 aaKnown RBP23.69■■□□□ 1.38
NEDD8-201ENST00000250495 ABI1Q8IZP0 508 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 COLGALT1Q8NBJ5 622 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 ETNPPLQ8TBG4 499 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 NLRP7Q8WX94 980 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 SLKQ9H2G2 1235 aaPredicted RBP23.69■■□□□ 1.38
NEDD8-201ENST00000250495 CWH43Q9H720 699 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 TLE6Q9H808 572 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 TLR9Q9NR96 1032 aa23.69■■□□□ 1.38
NEDD8-201ENST00000250495 DDX25Q9UHL0 483 aaKnown RBP23.69■■□□□ 1.38
NEDD8-201ENST00000250495 ARIH1Q9Y4X5 557 aaPredicted RBP23.69■■□□□ 1.38
NEDD8-201ENST00000250495 FAM86C2PA6NEL3 165 aa23.68■■□□□ 1.38
NEDD8-201ENST00000250495 INF2Q27J81 1249 aa23.68■■□□□ 1.38
NEDD8-201ENST00000250495 MTERF2Q49AM1 385 aa23.68■■□□□ 1.38
NEDD8-201ENST00000250495 ZNF668Q96K58 619 aaPredicted RBP23.68■■□□□ 1.38
NEDD8-201ENST00000250495 MSLNLQ96KJ4 702 aa23.68■■□□□ 1.38
NEDD8-201ENST00000250495 GCOM2Q9BZD3 368 aaPredicted RBP23.68■■□□□ 1.38
NEDD8-201ENST00000250495 PUF60Q9UHX1 559 aaKnown RBP23.68■■□□□ 1.38
NEDD8-201ENST00000250495 KCNJ14Q9UNX9 436 aa23.68■■□□□ 1.38
NEDD8-201ENST00000250495 PLXNA4Q9HCM2 1894 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 CCDC194A0A1B0GVG4 234 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 FSD2A1L4K1 749 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 DCXO43602 365 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 EYA4O95677 639 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 EOMESO95936 686 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 SCRN1Q12765 414 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 LETM2Q2VYF4 491 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 ECHDC2Q86YB7 292 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 FAM122AQ96E09 287 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 CASD1Q96PB1 797 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 PHF20Q9BVI0 1012 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 DACT1Q9NYF0 836 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 LZTS1Q9Y250 596 aa23.67■■□□□ 1.38
NEDD8-201ENST00000250495 IGKV6-21A0A0C4DH24 114 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 DDX11L8A8MPP1 907 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 PRR33A8MZF0 331 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 STBD1O95210 358 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 PSMC5P62195 406 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 PLCB3Q01970 1234 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 COASYQ13057 564 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 FAM20AQ96MK3 541 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 CDCA3Q99618 268 aaPredicted RBP23.66■■□□□ 1.38
NEDD8-201ENST00000250495 JPH2Q9BR39 696 aaPredicted RBP23.66■■□□□ 1.38
NEDD8-201ENST00000250495 INO80BQ9C086 356 aaPredicted RBP23.66■■□□□ 1.38
NEDD8-201ENST00000250495 CHST12Q9NRB3 414 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 CLEC1BQ9P126 229 aa23.66■■□□□ 1.38
NEDD8-201ENST00000250495 STK36Q9NRP7 1315 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 A0A0U1RQF3 1178 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 PFKFB2O60825 505 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 DKC1O60832 514 aaKnown RBP eCLIP23.65■■□□□ 1.38
NEDD8-201ENST00000250495 PLA2G5P39877 138 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 ERVFC1P60507 584 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 PPP4R3AQ6IN85 833 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 NEK8Q86SG6 692 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 LRRC43Q8N309 656 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 RNF169Q8NCN4 708 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 MRPS27Q92552 414 aaKnown RBP23.65■■□□□ 1.38
NEDD8-201ENST00000250495 CEP89Q96ST8 783 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 RNF19AQ9NV58 838 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 HCSTQ9UBK5 93 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 PCDHGC5Q9Y5F6 944 aa23.65■■□□□ 1.38
NEDD8-201ENST00000250495 MAFO75444 373 aaPredicted RBP23.64■■□□□ 1.37
NEDD8-201ENST00000250495 GCFC2P16383 781 aaKnown RBP23.64■■□□□ 1.37
NEDD8-201ENST00000250495 PPM1AP35813 382 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 ANAPC15P60006 121 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 KRT17Q04695 432 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 DRP2Q13474 957 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 ANKRD1Q15327 319 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 KCNT2Q6UVM3 1135 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 LRRC55Q6ZSA7 311 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 ZNF558Q96NG5 402 aa23.64■■□□□ 1.37
NEDD8-201ENST00000250495 NAP1L4Q99733 375 aaKnown RBP23.64■■□□□ 1.37
NEDD8-201ENST00000250495 SUCLA2Q9P2R7 463 aaPredicted RBP23.64■■□□□ 1.37
NEDD8-201ENST00000250495 TMEM150BA6NC51 233 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms