RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ANGEL2Q5VTE6 544 aaKnown RBP23.68■■□□□ 1.38
CLN6-201ENST00000249806 ZNF280CQ8ND82 737 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 ZCCHC17Q9NP64 241 aaKnown RBP23.68■■□□□ 1.38
CLN6-201ENST00000249806 RNF146Q9NTX7 359 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 LARSQ9P2J5 1176 aaKnown RBP23.68■■□□□ 1.38
CLN6-201ENST00000249806 DBR1Q9UK59 544 aaKnown RBP23.68■■□□□ 1.38
CLN6-201ENST00000249806 FBXL5Q9UKA1 691 aa23.68■■□□□ 1.38
CLN6-201ENST00000249806 SRCAPQ6ZRS2 3230 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 EXOC3O60645 756 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 CCNE2O96020 404 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 TCP1P17987 556 aaKnown RBP23.67■■□□□ 1.38
CLN6-201ENST00000249806 HMGCS2P54868 508 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 DCAF15Q66K64 600 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 HINFPQ9BQA5 517 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 PCIF1Q9H4Z3 704 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 PARP14Q460N5 1801 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 ZNF541Q9H0D2 1346 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 POLR3GO15318 223 aaPredicted RBP23.67■■□□□ 1.38
CLN6-201ENST00000249806 TUBBP07437 444 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 HDXQ7Z353 690 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 GPRC5CQ9NQ84 441 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 ZNF112Q9UJU3 913 aa23.67■■□□□ 1.38
CLN6-201ENST00000249806 BZW2Q9Y6E2 419 aaKnown RBP23.67■■□□□ 1.38
CLN6-201ENST00000249806 FTCDO95954 541 aa23.66■■□□□ 1.38
CLN6-201ENST00000249806 PICK1Q9NRD5 415 aa23.66■■□□□ 1.38
CLN6-201ENST00000249806 DOCK1Q14185 1865 aa23.66■■□□□ 1.38
CLN6-201ENST00000249806 COL11A1P12107 1806 aaPredicted RBP23.66■■□□□ 1.38
CLN6-201ENST00000249806 BACH1O14867 736 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 PRKCIP41743 596 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 SAMD3Q8N6K7 520 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 NAGPAQ9UK23 515 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 GFPT2O94808 682 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 MATR3P43243 847 aaKnown RBP eCLIP23.65■■□□□ 1.38
CLN6-201ENST00000249806 DNA2P51530 1060 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 NPEPPSP55786 919 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 SNRNP48Q6IEG0 339 aaKnown RBP23.65■■□□□ 1.38
CLN6-201ENST00000249806 SPATA4Q8NEY3 305 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 MS4A14Q96JA4 679 aa23.65■■□□□ 1.38
CLN6-201ENST00000249806 LYPLA2O95372 231 aa23.64■■□□□ 1.38
CLN6-201ENST00000249806 PLS3P13797 630 aa23.64■■□□□ 1.38
CLN6-201ENST00000249806 OAS2P29728 719 aaKnown RBP23.64■■□□□ 1.38
CLN6-201ENST00000249806 PLA2G4FQ68DD2 849 aa23.64■■□□□ 1.38
CLN6-201ENST00000249806 ALKBH5Q6P6C2 394 aaKnown RBP23.64■■□□□ 1.38
CLN6-201ENST00000249806 SLC9A9Q8IVB4 645 aa23.64■■□□□ 1.38
CLN6-201ENST00000249806 GOLGA5Q8TBA6 731 aa23.64■■□□□ 1.38
CLN6-201ENST00000249806 CCDC43Q96MW1 224 aaKnown RBP23.64■■□□□ 1.38
CLN6-201ENST00000249806 PACSIN2Q9UNF0 486 aaPredicted RBP23.64■■□□□ 1.38
CLN6-201ENST00000249806 RLFQ13129 1914 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 DLG4P78352 724 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 MRPS25P82663 173 aaKnown RBP23.64■■□□□ 1.37
CLN6-201ENST00000249806 BFSP1Q12934 665 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 C4orf19Q8IY42 314 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 REPS2Q8NFH8 660 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 TRPM4Q8TD43 1214 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 AS3MTQ9HBK9 375 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 PCDHGC5Q9Y5F6 944 aa23.64■■□□□ 1.37
CLN6-201ENST00000249806 LTBP3Q9NS15 1303 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 TARSL2A2RTX5 802 aaKnown RBP23.63■■□□□ 1.37
CLN6-201ENST00000249806 FDX1P10109 184 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 PSMC5P62195 406 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 CASP8Q14790 479 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 CCDC181Q5TID7 509 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 ZNF572Q7Z3I7 529 aaPredicted RBP23.63■■□□□ 1.37
CLN6-201ENST00000249806 ZSWIM2Q8NEG5 633 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 CBWD1Q9BRT8 395 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 DNAJC12Q9UKB3 198 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 WDR64B1ANS9 1081 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 NR3C2P08235 984 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 PEX3P56589 373 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 PPP2R5AQ15172 486 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 VSIG10LQ86VR7 867 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 HDAC7Q8WUI4 952 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 LRRC1Q9BTT6 524 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 PDE11AQ9HCR9 933 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 TCEAL9Q9UHQ7 104 aa23.63■■□□□ 1.37
CLN6-201ENST00000249806 GRID2IPA4D2P6 1211 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 H3BQF6 201 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 EVI5O60447 810 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 DRAP1Q14919 205 aaPredicted RBP23.62■■□□□ 1.37
CLN6-201ENST00000249806 XKR9Q5GH70 373 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 C10orf76Q5T2E6 689 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 HAUS6Q7Z4H7 955 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 MMGT1Q8N4V1 131 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 ZMYND15Q9H091 742 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 TMEM206Q9H813 350 aa23.62■■□□□ 1.37
CLN6-201ENST00000249806 ZNF214Q9UL59 606 aaPredicted RBP23.62■■□□□ 1.37
CLN6-201ENST00000249806 SLC16A4O15374 487 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 MAPTP10636 758 aaKnown RBP23.61■■□□□ 1.37
CLN6-201ENST00000249806 DSG3P32926 999 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 STAT1P42224 750 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 TMEM132BQ14DG7 1078 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 R3HDM1Q15032 1099 aaKnown RBP23.61■■□□□ 1.37
CLN6-201ENST00000249806 ACCSQ96QU6 501 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 INTS2Q9H0H0 1204 aaKnown RBP23.61■■□□□ 1.37
CLN6-201ENST00000249806 PNMA2Q9UL42 364 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 TELO2Q9Y4R8 837 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 KIAA1217Q5T5P2 1943 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 LRRIQ3A6PVS8 624 aaPredicted RBP23.61■■□□□ 1.37
CLN6-201ENST00000249806 F8VZ95 297 aa23.61■■□□□ 1.37
CLN6-201ENST00000249806 DDX3XO00571 662 aaKnown RBP eCLIP23.61■■□□□ 1.372e-13■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms