RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ZNF211Q13398 564 aaPredicted RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 PKN1Q16512 942 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 PROM2Q8N271 834 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 MSL3Q8N5Y2 521 aaKnown RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 TSEN2Q8NCE0 465 aaKnown RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 THOC1Q96FV9 657 aaKnown RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 DYDC2Q96IM9 177 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 SEC16BQ96JE7 1060 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 RUNDC3BQ96NL0 473 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 MLXIPLQ9NP71 852 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 ARHGAP20Q9P2F6 1191 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 GLI1P08151 1106 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 ADCY8P40145 1251 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 AMPD2Q01433 879 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 SLC18A3Q16572 532 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 SUPT20HL1Q3ZLR7 823 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 FYB2Q5VWT5 728 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 PTF1AQ7RTS3 328 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 AENQ8WTP8 325 aaKnown RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 CASKIN2Q8WXE0 1202 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 MCUR1Q96AQ8 359 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 NT5C1BQ96P26 610 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 SLC4A9Q96Q91 983 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 RAB3IPQ96QF0 476 aaPredicted RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 DNAJC17Q9NVM6 304 aaKnown RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 NOP53Q9NZM5 478 aaKnown RBP9.99□□□□□ -0.81
COL21A1-201ENST00000244728 TBK1Q9UHD2 729 aa9.99□□□□□ -0.81
COL21A1-201ENST00000244728 A0A1W2PQJ5 194 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 LRRC10BA6NIK2 292 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 GOLGA8SH3BPF8 625 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 PDE6CP51160 858 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SLC8A3P57103 927 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 NFIAQ12857 509 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 DRP2Q13474 957 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 RAD54LQ92698 747 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 EDEM3Q9BZQ6 932 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 NRBP2Q9NSY0 501 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SPATS2LQ9NUQ6 558 aaKnown RBP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 GGT7Q9UJ14 662 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 TTI1O43156 1089 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 ACSL3O95573 720 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 GCLMP48507 274 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 MXI1P50539 228 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SEMA3FQ13275 785 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SNX1Q13596 522 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 TAF12Q16514 161 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 MUM1Q2TAK8 710 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 RC3H1Q5TC82 1133 aaKnown RBP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 CASC4Q6P4E1 433 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SUGP1Q8IWZ8 645 aaKnown RBP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 MYMKA6NI61 221 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 EIF4E1BA6NMX2 242 aaKnown RBP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 hCG_1984214I3L0E3 225 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 FANCGO15287 622 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 NDUFB10O96000 172 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 NSFP46459 744 aaKnown RBP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 TAF11Q15544 211 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SLC27A3Q5K4L6 730 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 NLRP4Q96MN2 994 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 PIK3CAP42336 1068 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 PTK2Q05397 1052 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 MTMR1Q13613 665 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 SNRNP48Q6IEG0 339 aaKnown RBP9.98□□□□□ -0.81
COL21A1-201ENST00000244728 CREG2Q8IUH2 290 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 THNSL1Q8IYQ7 743 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 VPS52Q8N1B4 723 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 ZNF653Q96CK0 615 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 PNMA2Q9UL42 364 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 AKT3Q9Y243 479 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 PCDHB4Q9Y5E5 795 aa9.98□□□□□ -0.81
COL21A1-201ENST00000244728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.97□□□□□ -0.81
COL21A1-201ENST00000244728 RCCD1A6NED2 376 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 KIF1CO43896 1103 aaKnown RBP9.97□□□□□ -0.81
COL21A1-201ENST00000244728 HSD17B3P37058 310 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 ADCY2Q08462 1091 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 ZNF543Q08ER8 600 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 LRRC14Q15048 493 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 SEC23AQ15436 765 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 AP1ARQ63HQ0 302 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 TSNARE1Q96NA8 513 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 SMC6Q96SB8 1091 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 TRIM51Q9BSJ1 452 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 VPS37BQ9H9H4 285 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 POLLQ9UGP5 575 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL21A1-201ENST00000244728 REXO2Q9Y3B8 237 aaKnown RBP9.97□□□□□ -0.81
COL21A1-201ENST00000244728 K7ERI5 159 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 SLC16A4O15374 487 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 FAM153BP0C7A2 387 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 TRIM49P0CI25 452 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 TRIM49CP0CI26 452 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 PRLRP16471 622 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 PBX1P40424 430 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 PMS2P54278 862 aa9.97□□□□□ -0.81
COL21A1-201ENST00000244728 FAM153CQ494X1 144 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms