RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 BCORQ6W2J9 1755 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 MYO5AQ9Y4I1 1855 aaKnown RBP8.95□□□□□ -0.98
CXCR4-201ENST00000241393 CHD4Q14839 1912 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 ERICH2A1L162 156 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 KIF2AO00139 706 aaPredicted RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 LRMPQ12912 555 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 UBE4AQ14139 1066 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 RASA3Q14644 834 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 PLA2G4EQ3MJ16 856 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 ANKRD39Q53RE8 183 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 NBPF12Q5TAG4 269 aaPredicted RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 RESP18Q5W5W9 173 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 CCDC150Q8NCX0 1101 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 FOXP1Q9H334 677 aaPredicted RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 PRR13Q9NZ81 148 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 ROBO1Q9Y6N7 1651 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 NRDCO43847 1150 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 RANBP6O60518 1105 aaKnown RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 PPM1BO75688 479 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 WDHD1O75717 1129 aaPredicted RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 DEXIO95424 95 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 MMP1P03956 469 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 TUBB4AP04350 444 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 TDO2P48775 406 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 NT5C2P49902 561 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 RBM10P98175 930 aaKnown RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 WTAPQ15007 396 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 SF3B3Q15393 1217 aaKnown RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 DPCR1Q3MIW9 517 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 RILPL1Q5EBL4 403 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 C22orf34Q6ZV56 151 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 NOSTRINQ8IVI9 506 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 OSBPL1AQ9BXW6 950 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 ARMT1Q9H993 441 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 HOOK1Q9UJC3 728 aaKnown RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 DENND2AQ9ULE3 1009 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 PCDHB10Q9UN67 800 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 PCDHB12Q9Y5F1 795 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 SLC4A4Q9Y6R1 1079 aa8.94□□□□□ -0.98
CXCR4-201ENST00000241393 PDS5AQ29RF7 1337 aaKnown RBP8.94□□□□□ -0.98
CXCR4-201ENST00000241393 MROH7-TTC4A0A0A0MT08 1334 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 TLDC2A0PJX2 215 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 TP53P04637 393 aaPredicted RBP8.93□□□□□ -0.98
CXCR4-201ENST00000241393 SKILP12757 684 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 ITGA4P13612 1032 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 TNNT1P13805 278 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 CHRNDQ07001 517 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 NFIAQ12857 509 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 ECM29Q5VYK3 1845 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 SHC4Q6S5L8 630 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 RAB11FIP4Q86YS3 637 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 C7orf61Q8IZ16 206 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 LRRC47Q8N1G4 583 aaKnown RBP8.93□□□□□ -0.98
CXCR4-201ENST00000241393 LCORLQ8N3X6 602 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 FBXL6Q8N531 539 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 PIWIL2Q8TC59 973 aaKnown RBP8.93□□□□□ -0.98
CXCR4-201ENST00000241393 PHKBQ93100 1093 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 SLC26A6Q9BXS9 759 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 TPSG1Q9NRR2 321 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 GJB4Q9NTQ9 266 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 FBXL21Q9UKT6 434 aa8.93□□□□□ -0.98
CXCR4-201ENST00000241393 NIP7Q9Y221 180 aaKnown RBP eCLIP8.93□□□□□ -0.98
CXCR4-201ENST00000241393 CBFA2T2O43439 604 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 SUSD5O60279 629 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 CCZ1BP86790 482 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 CCZ1P86791 482 aaPredicted RBP8.92□□□□□ -0.98
CXCR4-201ENST00000241393 PPARAQ07869 468 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 ITPK1Q13572 414 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 AUHQ13825 339 aaKnown RBP8.92□□□□□ -0.98
CXCR4-201ENST00000241393 TPD52L1Q16890 204 aaPredicted RBP8.92□□□□□ -0.98
CXCR4-201ENST00000241393 NBPF11Q86T75 865 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 ESR2Q92731 530 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 MFSD14AQ96MC6 490 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 AIFM3Q96NN9 605 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 BRIP1Q9BX63 1249 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 RNF26Q9BY78 433 aaPredicted RBP8.92□□□□□ -0.98
CXCR4-201ENST00000241393 PIF1Q9H611 641 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 WHRNQ9P202 907 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 LRP2BPQ9P2M1 347 aa8.92□□□□□ -0.98
CXCR4-201ENST00000241393 KAT6BQ8WYB5 2073 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 SPATA31A5Q5VU36 1347 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 SPATA31A7Q8IWB4 1347 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 B2RBV5 119 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 EOMESO95936 686 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 BMP15O95972 392 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 IGHA1P01876 353 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 XBP1P17861 261 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 MARCKSP29966 332 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 MYL5Q02045 173 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 ZC3H12BQ5HYM0 836 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 CT47A1Q5JQC4 288 aaPredicted RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 SLC10A5Q5PT55 438 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 NOL9Q5SY16 702 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 KRBA2Q6ZNG9 492 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 ADAT2Q7Z6V5 191 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 ANKRD18AQ8IVF6 992 aa8.91□□□□□ -0.98
CXCR4-201ENST00000241393 DIS3L2Q8IYB7 885 aaKnown RBP8.91□□□□□ -0.98
CXCR4-201ENST00000241393 TRIML1Q8N9V2 468 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms