RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 FAM71BQ8TC56 605 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 AENQ8WTP8 325 aaKnown RBP17.65■□□□□ 0.42
UBE3D-201ENST00000237186 TIPINQ9BVW5 301 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 ST6GALNAC4Q9H4F1 302 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 ADAM21Q9UKJ8 722 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 ALAS1P13196 640 aa17.64■□□□□ 0.41
UBE3D-201ENST00000237186 RARRES1P49788 294 aa17.64■□□□□ 0.41
UBE3D-201ENST00000237186 SNRPFP62306 86 aaKnown RBP17.64■□□□□ 0.41
UBE3D-201ENST00000237186 MTMR1Q13613 665 aa17.64■□□□□ 0.41
UBE3D-201ENST00000237186 KSR1Q8IVT5 923 aa17.64■□□□□ 0.41
UBE3D-201ENST00000237186 SLC30A5Q8TAD4 765 aa17.64■□□□□ 0.41
UBE3D-201ENST00000237186 RAVER2Q9HCJ3 691 aaKnown RBP17.64■□□□□ 0.41
UBE3D-201ENST00000237186 DMGDHQ9UI17 866 aaKnown RBP17.64■□□□□ 0.41
UBE3D-201ENST00000237186 BCS1LQ9Y276 419 aa17.64■□□□□ 0.41
UBE3D-201ENST00000237186 BRCA1P38398 1863 aaKnown RBP17.64■□□□□ 0.41
UBE3D-201ENST00000237186 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 MYBL2P10244 700 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 RFX1P22670 979 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 SOX5P35711 763 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 NPEPPSP55786 919 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 RPS6P62753 249 aaKnown RBP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 ENOX2Q16206 610 aaKnown RBP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 XRRA1Q6P2D8 792 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 C4orf19Q8IY42 314 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 CPXCR1Q8N123 301 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 LRRC57Q8N9N7 239 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 INPP4AQ96PE3 977 aaPredicted RBP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 TAAR1Q96RJ0 339 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 PSMB7Q99436 277 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 SYT11Q9BT88 431 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 HPCAL4Q9UM19 191 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 FER1L6Q2WGJ9 1857 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 F8VZ95 297 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 DDX39AO00148 427 aaKnown RBP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 DDX3XO00571 662 aaKnown RBP eCLIP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 MAPK13O15264 365 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 P4HA2O15460 535 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 ZMYND10O75800 440 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 PLS3P13797 630 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 VCAM1P19320 739 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 BFSP1Q12934 665 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 PGM5Q15124 567 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 CBWD6Q4V339 395 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 HSP90B2PQ58FF3 399 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 CBWD3Q5JTY5 395 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 CBWD5Q5RIA9 395 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 GJB7Q6PEY0 223 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 OLIG1Q8TAK6 271 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 HDAC7Q8WUI4 952 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 RBM12Q9NTZ6 932 aaKnown RBP17.63■□□□□ 0.41
UBE3D-201ENST00000237186 STIM2Q9P246 746 aa17.63■□□□□ 0.41
UBE3D-201ENST00000237186 EVI5O60447 810 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 EXOC3O60645 756 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 N4BP1O75113 896 aaKnown RBP17.62■□□□□ 0.41
UBE3D-201ENST00000237186 ZBED4O75132 1171 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 FTCDO95954 541 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 CCDC172P0C7W6 258 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 CYP2J2P51589 502 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 GTF2BQ00403 316 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 INTS8Q75QN2 995 aaKnown RBP17.62■□□□□ 0.41
UBE3D-201ENST00000237186 SLFN11Q7Z7L1 901 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 SYCP3Q8IZU3 236 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 SLC17A8Q8NDX2 589 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 ACCSQ96QU6 501 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 SELENOOQ9BVL4 669 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 DNAJC12Q9UKB3 198 aa17.62■□□□□ 0.41
UBE3D-201ENST00000237186 PMM2O15305 246 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 EGFRP00533 1210 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 H2AFZP0C0S5 128 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 JAK3P52333 1124 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 H2AFVQ71UI9 128 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 TPCN2Q8NHX9 752 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 LMO3Q8TAP4 145 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 LMBR1Q8WVP7 490 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 VTI1AQ96AJ9 217 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 MS4A14Q96JA4 679 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 PBKQ96KB5 322 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 PDCD2LQ9BRP1 358 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 GPR88Q9GZN0 384 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 SMARCAL1Q9NZC9 954 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 EHD2Q9NZN4 543 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 APEX2Q9UBZ4 518 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 TMEM59LQ9UK28 342 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 K7ENM7 598 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 SYF2O95926 243 aaKnown RBP17.61■□□□□ 0.41
UBE3D-201ENST00000237186 ZBTB48P10074 688 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-201ENST00000237186 LMNB1P20700 586 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 YWHABP31946 246 aaKnown RBP17.61■□□□□ 0.41
UBE3D-201ENST00000237186 SFNP31947 248 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 SPP2Q13103 211 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 DRAP1Q14919 205 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-201ENST00000237186 RPS6KA1Q15418 735 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 RDM1Q8NG50 284 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 TRERF1Q96PN7 1200 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 IWS1Q96ST2 819 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 INTS2Q9H0H0 1204 aaKnown RBP17.61■□□□□ 0.41
UBE3D-201ENST00000237186 PXMP2Q9NR77 195 aa17.61■□□□□ 0.41
UBE3D-201ENST00000237186 ANKEF1Q9NU02 776 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms