RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CEP170P1Q96L14 293 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 AK8Q96MA6 479 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 ASB2Q96Q27 587 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 NACC1Q96RE7 527 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 CERS4Q9HA82 394 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 ANKEF1Q9NU02 776 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 RAPGEFL1Q9UHV5 662 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 SLC26A4O43511 780 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 ARHGEF15O94989 841 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 C22orf31O95567 290 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 ZSCAN22P10073 491 aaPredicted RBP12.59□□□□□ -0.39
SF3B6-201ENST00000233468 RPA1P27694 616 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 CCT6AP40227 531 aaKnown RBP12.59□□□□□ -0.39
SF3B6-201ENST00000233468 MRPS6P82932 125 aaKnown RBP12.59□□□□□ -0.39
SF3B6-201ENST00000233468 CYP4A11Q02928 519 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 CTTNQ14247 550 aaKnown RBP12.59□□□□□ -0.39
SF3B6-201ENST00000233468 SF3A1Q15459 793 aaKnown RBP12.59□□□□□ -0.39
SF3B6-201ENST00000233468 MTERF2Q49AM1 385 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 FAM26DQ5JW98 314 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 PPP2R2DQ66LE6 453 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 ATL3Q6DD88 541 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 IGSF22Q8N9C0 903 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 TRAPPC12Q8WVT3 735 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 DNAJB3Q8WWF6 145 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 ATXN2LQ8WWM7 1075 aaKnown RBP12.59□□□□□ -0.39
SF3B6-201ENST00000233468 FAM49AQ9H0Q0 323 aaPredicted RBP12.59□□□□□ -0.39
SF3B6-201ENST00000233468 CYP26B1Q9NR63 512 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 RGL1Q9NZL6 768 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 THEGQ9P2T0 379 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 ATP6V1DQ9Y5K8 247 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 SQORQ9Y6N5 450 aa12.59□□□□□ -0.39
SF3B6-201ENST00000233468 EPOPA6NHQ4 379 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 ZBTB42B2RXF5 422 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 MAFO75444 373 aaPredicted RBP12.58□□□□□ -0.4
SF3B6-201ENST00000233468 BAIAP3O94812 1187 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 CTSHP09668 335 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 ATP2A2P16615 1042 aaKnown RBP12.58□□□□□ -0.4
SF3B6-201ENST00000233468 LONP1P36776 959 aaKnown RBP12.58□□□□□ -0.4
SF3B6-201ENST00000233468 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
SF3B6-201ENST00000233468 POLGP54098 1239 aaPredicted RBP12.58□□□□□ -0.4
SF3B6-201ENST00000233468 TFF2Q03403 129 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 TARBP2Q15633 366 aaKnown RBP12.58□□□□□ -0.4
SF3B6-201ENST00000233468 XKR9Q5GH70 373 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 EFCAB12Q6NXP0 572 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 CNKSR3Q6P9H4 555 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 RUFY4Q6ZNE9 571 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 ANO5Q75V66 913 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 SPRED2Q7Z698 418 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 ADAMTS19Q8TE59 1207 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 SNX29Q8TEQ0 813 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 TCP11Q8WWU5 503 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 SEPT8Q92599 483 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 APBB2Q92870 758 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 CDK5RAP3Q96JB5 506 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 NECAB3Q96P71 396 aaPredicted RBP12.58□□□□□ -0.4
SF3B6-201ENST00000233468 SUGCTQ9HAC7 445 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 AKT3Q9Y243 479 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 PCDHA11Q9Y5I1 949 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 TRPV2Q9Y5S1 764 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 KDM3AQ9Y4C1 1321 aa12.58□□□□□ -0.4
SF3B6-201ENST00000233468 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 DGAT1O75907 488 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 F13A1P00488 732 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 CXCL10P02778 98 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 CA3P07451 260 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 UBA7P41226 1012 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 MRPS5P82675 430 aaKnown RBP12.57□□□□□ -0.4
SF3B6-201ENST00000233468 IKBKEQ14164 716 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 CATSPER3Q86XQ3 398 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 KIAA0319LQ8IZA0 1049 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 WNT8BQ93098 351 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 CELF4Q9BZC1 486 aaKnown RBP12.57□□□□□ -0.4
SF3B6-201ENST00000233468 NT5C3AQ9H0P0 336 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 DBR1Q9UK59 544 aaKnown RBP12.57□□□□□ -0.4
SF3B6-201ENST00000233468 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 DNM3Q9UQ16 869 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 CDY2AQ9Y6F7 541 aa12.57□□□□□ -0.4
SF3B6-201ENST00000233468 MORC2Q9Y6X9 1032 aaPredicted RBP12.57□□□□□ -0.4
SF3B6-201ENST00000233468 ABHD14A-ACY1A0A1B0GW23 586 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 STBD1O95210 358 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 SPATA31C1P0DKV0 1188 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 COL9A1P20849 921 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 TXLNAP40222 546 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 KCNJ6P48051 423 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
SF3B6-201ENST00000233468 NUCB2P80303 420 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 STK38Q15208 465 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 TRAF7Q6Q0C0 670 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 TMCO2Q7Z6W1 182 aaPredicted RBP12.56□□□□□ -0.4
SF3B6-201ENST00000233468 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 SCLT1Q96NL6 688 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 INO80BQ9C086 356 aaPredicted RBP12.56□□□□□ -0.4
SF3B6-201ENST00000233468 ATP6V0A4Q9HBG4 840 aa12.56□□□□□ -0.4
SF3B6-201ENST00000233468 COL4A4P53420 1690 aaPredicted RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 IGKV6-21A0A0C4DH24 114 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 ARHGEF35A5YM69 484 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 ASAP2O43150 1006 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 NBNO60934 754 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms