RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 SATB2Q9UPW6 733 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 PCDHB6Q9Y5E3 794 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 COPEO14579 308 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 ORC4O43929 436 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 FTCDO95954 541 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 USP17L8P0C7I0 530 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 SLC1A1P43005 524 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 STILQ15468 1287 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 MAPK6Q16659 721 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.71□□□□□ -1.17
CPS1-201ENST00000233072 CHMP6Q96FZ7 201 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 TRIM55Q9BYV6 548 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 PNPLA7Q6ZV29 1317 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 TSPOAP1O95153 1857 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 CTNND1O60716 968 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 HUS1O60921 280 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 SPAG7O75391 227 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 CYP2E1P05181 493 aaPredicted RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 P4HBP07237 508 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 USP11P51784 963 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 UBXN2AP68543 259 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 CTTNQ14247 550 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 RASSF3Q86WH2 238 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 WDR75Q8IWA0 830 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 CCDC138Q96M89 665 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 MRPL4Q9BYD3 311 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 PLEKHA4Q9H4M7 779 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 MRGBPQ9NV56 204 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 ASB14A6NK59 587 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 H3BRJ5 948 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 MEIS1O00470 390 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 HNRNPCL1O60812 293 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 SESN3P58005 492 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 COASYQ13057 564 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 MIGA2Q7L4E1 593 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 CATSPER4Q7RTX7 472 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 SCYL3Q8IZE3 742 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 ACRBPQ8NEB7 543 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 TTLL11Q8NHH1 800 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 TTC8Q8TAM2 541 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 HSPH1Q92598 858 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 SLITRK6Q9H5Y7 841 aa7.71□□□□□ -1.18
CPS1-201ENST00000233072 EML4Q9HC35 981 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 RRP15Q9Y3B9 282 aaKnown RBP7.71□□□□□ -1.18
CPS1-201ENST00000233072 GOLGA8JA6NMD2 632 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 PRKAB2O43741 272 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ESRRAP11474 423 aaPredicted RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 DYNLT1P63172 113 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 NAALADL2Q58DX5 795 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SUSD4Q5VX71 490 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ALKBH5Q6P6C2 394 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 MCUQ8NE86 351 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 OR6B3Q8NGW1 331 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SH3RF3Q8TEJ3 882 aaPredicted RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 SEPT8Q92599 483 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 PPWD1Q96BP3 646 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 INTS2Q9H0H0 1204 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 KCND2Q9NZV8 630 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ZNF335Q9H4Z2 1342 aaPredicted RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 A0A1W2PQC6 194 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SPDYE2BA6NHP3 402 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ENC1O14682 589 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 CPDO75976 1380 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 APOEP02649 317 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SPDYE6P0CI01 402 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 RECQLP46063 649 aaPredicted RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 IFT88Q13099 833 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 KRT33BQ14525 404 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 TBCCQ15814 346 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SPATA31A3Q5VYP0 1347 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 PADI6Q6TGC4 694 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SPDYE1Q8NFV5 336 aaPredicted RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 KLHL29Q96CT2 875 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SNF8Q96H20 258 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 PGBD1Q96JS3 809 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 FSD1LQ9BXM9 530 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 GINM1Q9NU53 330 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ABHD10Q9NUJ1 306 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 LIG3P49916 1009 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 PSMC5P62195 406 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 TSTA3Q13630 321 aaPredicted RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 DHX34Q14147 1143 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 FRMD5Q7Z6J6 570 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 RAB42Q8N4Z0 105 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 MMP19Q99542 508 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 LMTK2Q8IWU2 1503 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 CRB1P82279 1406 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 USP31Q70CQ4 1352 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 NEDD4P46934 1319 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 TARSL2A2RTX5 802 aaKnown RBP7.7□□□□□ -1.18
CPS1-201ENST00000233072 CLDN3O15551 220 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ECE2O60344 883 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 ATP6V1E1P36543 226 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 EFNA5P52803 228 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 COPS2P61201 443 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 MFSD14CQ5VZR4 134 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 CYP4F22Q6NT55 531 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 GPD1LQ8N335 351 aa7.7□□□□□ -1.18
CPS1-201ENST00000233072 SYT2Q8N9I0 419 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms