RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 NEUROG2Q9H2A3 272 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
LTBR-201ENST00000228918 CHMP2AO43633 222 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 CPP00450 1065 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 ITGA4P13612 1032 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 COG2Q14746 738 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 UAP1Q16222 522 aaPredicted RBP17.7■□□□□ 0.42
LTBR-201ENST00000228918 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
LTBR-201ENST00000228918 DDX42Q86XP3 938 aaKnown RBP eCLIP17.7■□□□□ 0.42
LTBR-201ENST00000228918 NLGN1Q8N2Q7 840 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 SLC5A5Q92911 643 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 SYT11Q9BT88 431 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 SLITRK6Q9H5Y7 841 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 TMBIM4Q9HC24 238 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 NDUFAB1O14561 156 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 ECE2O60344 883 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 LMNB1P20700 586 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 LSP1P33241 339 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 ZNF131P52739 623 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 ITGB3BPQ13352 177 aaPredicted RBP17.7■□□□□ 0.42
LTBR-201ENST00000228918 SPICE1Q8N0Z3 855 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 FBXO41Q8TF61 875 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 LRRC45Q96CN5 670 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 GPR88Q9GZN0 384 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 SEL1LQ9UBV2 794 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 DNAJC12Q9UKB3 198 aa17.7■□□□□ 0.42
LTBR-201ENST00000228918 ZBTB39O15060 712 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 PRELPP51888 382 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 GUCY1A3Q02108 690 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 DRAP1Q14919 205 aaPredicted RBP17.69■□□□□ 0.42
LTBR-201ENST00000228918 GLYCTKQ8IVS8 523 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 KSR1Q8IVT5 923 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 TEX2Q8IWB9 1127 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 RFFLQ8WZ73 363 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 OSGEPQ9NPF4 335 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 SYNPO2Q9UMS6 1093 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 COL2A1P02458 1487 aaPredicted RBP17.69■□□□□ 0.42
LTBR-201ENST00000228918 LOXHD1Q8IVV2 1947 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 H0YGN5 161 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 ENTPD3O75355 529 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 TRIM37O94972 964 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 TMEM253P0C7T8 217 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 STAT2P52630 851 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 CBWD6Q4V339 395 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 CBWD3Q5JTY5 395 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 CBWD5Q5RIA9 395 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 ZNF720Q7Z2F6 126 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 TDRD3Q9H7E2 651 aaKnown RBP17.69■□□□□ 0.42
LTBR-201ENST00000228918 AGPAT3Q9NRZ7 376 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 DMAC2Q9NW81 257 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 AMACRQ9UHK6 382 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 TTC7AQ9ULT0 858 aaPredicted RBP17.69■□□□□ 0.42
LTBR-201ENST00000228918 SAMM50Q9Y512 469 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 NFS1Q9Y697 457 aa17.69■□□□□ 0.42
LTBR-201ENST00000228918 IGSF9BQ9UPX0 1349 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 BUB1BO60566 1050 aaPredicted RBP17.68■□□□□ 0.42
LTBR-201ENST00000228918 CFBP00751 764 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 HSPA1LP34931 641 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 HS2ST1Q7LGA3 356 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 FAM178BQ8IXR5 827 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 PROCA1Q8NCQ7 364 aaPredicted RBP17.68■□□□□ 0.42
LTBR-201ENST00000228918 SEC14L1Q92503 715 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 EPN3Q9H201 632 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 TRPC5Q9UL62 973 aaPredicted RBP17.68■□□□□ 0.42
LTBR-201ENST00000228918 ATXN2Q99700 1313 aaKnown RBP17.68■□□□□ 0.42
LTBR-201ENST00000228918 GOLGA6L10A6NI86 522 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 PPP1R37O75864 691 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 MUTP22033 750 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 PPATQ06203 517 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 PPP2R5AQ15172 486 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 SLC35G2Q8TBE7 412 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 INTS2Q9H0H0 1204 aaKnown RBP17.68■□□□□ 0.42
LTBR-201ENST00000228918 ODF2LQ9ULJ1 636 aa17.68■□□□□ 0.42
LTBR-201ENST00000228918 TTI1O43156 1089 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 GAS7O60861 476 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 MDH1P40925 334 aaKnown RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 ECE1P42892 770 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 CYP2J2P51589 502 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 TRAF1Q13077 416 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 PTGISQ16647 500 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 STXBP4Q6ZWJ1 553 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 CCDC26Q8TAB7 109 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.42
LTBR-201ENST00000228918 KCND2Q9NZV8 630 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 WRAP73Q9P2S5 460 aaPredicted RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 APEX2Q9UBZ4 518 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 FRMD4BQ9Y2L6 1034 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 DDX3YO15523 660 aaKnown RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 DAPK3O43293 454 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 MYZAPP0CAP1 466 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 CTNNA1P35221 906 aaKnown RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 MYL7Q01449 175 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 POU5F1Q01860 360 aaKnown RBP17.67■□□□□ 0.42
LTBR-201ENST00000228918 ZNF844Q08AG5 666 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
LTBR-201ENST00000228918 B4GALNT4Q76KP1 1039 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms