RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PVALEFA0A1B0GWK0 134 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 ZNF157P51786 506 aaPredicted RBP20.29■□□□□ 0.84
SMPD3-201ENST00000219334 VPS72Q15906 364 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 BCAS4Q8TDM0 211 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 PYROXD1Q8WU10 500 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 RBM41Q96IZ5 413 aaKnown RBP20.29■□□□□ 0.84
SMPD3-201ENST00000219334 PCDHA10Q9Y5I2 948 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 TOM1L1O75674 476 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 SDC4P31431 198 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 CLNS1AP54105 237 aaKnown RBP20.29■□□□□ 0.84
SMPD3-201ENST00000219334 FAF2Q96CS3 445 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 FSD1LQ9BXM9 530 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 TMEM260Q9NX78 707 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 EXOC1LA0A1B0GW35 172 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 POTEB3A0JP26 581 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 POTECB2RU33 542 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 GSTA4O15217 222 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 KCTD16Q68DU8 428 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 POTEBQ6S5H4 581 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 TEX2Q8IWB9 1127 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 EPS15L1Q9UBC2 864 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 ANAPC7Q9UJX3 599 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 A0A087WWV3 80 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 KCNJ6P48051 423 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 KRT31Q15323 416 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 OR6J1Q8NGC5 347 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 ZNF668Q96K58 619 aaPredicted RBP20.29■□□□□ 0.84
SMPD3-201ENST00000219334 LXNQ9BS40 222 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 TACO1Q9BSH4 297 aaKnown RBP20.29■□□□□ 0.84
SMPD3-201ENST00000219334 BARHL2Q9NY43 387 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 SLC9A2Q9UBY0 812 aa20.29■□□□□ 0.84
SMPD3-201ENST00000219334 MTMR2Q13614 643 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 KYAT1Q16773 422 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 TBC1D16Q8TBP0 767 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 RNF217Q8TC41 542 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 KBTBD13C9JR72 458 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 RESP18Q5W5W9 173 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 NUDT18Q6ZVK8 323 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 VSTM4Q8IW00 320 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 TTC13Q8NBP0 860 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 MAP3K20Q9NYL2 800 aaKnown RBP20.28■□□□□ 0.84
SMPD3-201ENST00000219334 ABCC3O15438 1527 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 AKR1B1P15121 316 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 DR1Q01658 176 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 CYP27A1Q02318 531 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 TAF1BQ53T94 588 aaPredicted RBP20.28■□□□□ 0.84
SMPD3-201ENST00000219334 SPDL1Q96EA4 605 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 SLFNL1Q499Z3 407 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 N4BP2L2Q92802 583 aaPredicted RBP20.28■□□□□ 0.84
SMPD3-201ENST00000219334 ZNF560Q96MR9 790 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 BCL2L12Q9HB09 334 aa20.28■□□□□ 0.84
SMPD3-201ENST00000219334 M0QYV0 167 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 MAP3K7O43318 606 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 SNAPC2Q13487 334 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 ZNF579Q8NAF0 562 aaKnown RBP20.27■□□□□ 0.84
SMPD3-201ENST00000219334 PARK7Q99497 189 aaKnown RBP20.27■□□□□ 0.84
SMPD3-201ENST00000219334 NRBP1Q9UHY1 535 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 RAD51Q06609 339 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 SOWAHDA6NJG2 315 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 C19orf81C9J6K1 198 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 ZRANB2O95218 330 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMPD3-201ENST00000219334 YAF2Q8IY57 180 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 GINM1Q9NU53 330 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 TAC1P20366 129 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 USP11P51784 963 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 COASYQ13057 564 aa20.27■□□□□ 0.84
SMPD3-201ENST00000219334 IQANK1A0A1B0GTG1 560 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 TRIM28Q13263 835 aaKnown RBP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 CC2D1AQ6P1N0 951 aaPredicted RBP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 PASD1Q8IV76 773 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 LBHD1Q9BQE6 289 aaPredicted RBP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 MAGEB5Q9BZ81 275 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 A2ML1A8K2U0 1454 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 A8MXQ7 604 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 APOEP02649 317 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 CA4P22748 312 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 KNOP1Q1ED39 458 aaKnown RBP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 TEX13BQ9BXU2 312 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 TRAPPC3O43617 180 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 STAT5BP51692 787 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 VAMP7P51809 220 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 PANX2Q96RD6 677 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 ORC6Q9Y5N6 252 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 ORC4O43929 436 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 EFNA5P52803 228 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 YWHAHQ04917 246 aaPredicted RBP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 ACCSLQ4AC99 568 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 FRA10AC1Q70Z53 315 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 EXT2Q93063 718 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 LY9Q9HBG7 655 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 CEP72Q9P209 647 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 TBK1Q9UHD2 729 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 CDR2Q01850 454 aa20.26■□□□□ 0.83
SMPD3-201ENST00000219334 PPWD1Q96BP3 646 aaKnown RBP20.26■□□□□ 0.83
SMPD3-201ENST00000219334 CDC42EP1Q00587 391 aa20.25■□□□□ 0.83
SMPD3-201ENST00000219334 C2orf54Q08AI8 447 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms