RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
TUBB1-201ENST00000217133 ILDR2Q71H61 639 aa10.48□□□□□ -0.73
TUBB1-201ENST00000217133 ARMC2Q8NEN0 867 aa10.48□□□□□ -0.73
TUBB1-201ENST00000217133 FBXO25Q8TCJ0 367 aa10.48□□□□□ -0.73
TUBB1-201ENST00000217133 EBF2Q9HAK2 575 aa10.48□□□□□ -0.73
TUBB1-201ENST00000217133 HOMER3Q9NSC5 361 aa10.48□□□□□ -0.73
TUBB1-201ENST00000217133 TRPC6Q9Y210 931 aa10.48□□□□□ -0.73
TUBB1-201ENST00000217133 KDM3AQ9Y4C1 1321 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 IGF2BP3O00425 579 aaKnown RBP eCLIP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 RASGRF2O14827 1237 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 SUN1O94901 812 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 RASA1P20936 1047 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 PON1P27169 355 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 NT5C2P49902 561 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 MARSP56192 900 aaKnown RBP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 PTENP60484 403 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 SPDYCQ5MJ68 293 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 JAMLQ86YT9 394 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 KIF2BQ8N4N8 673 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 MAB21L3Q8N8X9 362 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 ATXN2LQ8WWM7 1075 aaKnown RBP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 OSGEPQ9NPF4 335 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 ARAP2Q8WZ64 1704 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 FAM187AA6NFU0 413 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 RTN2O75298 545 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 NUDT17P0C025 328 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 FERP16591 822 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 CDC25CP30307 473 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 ALDH5A1P51649 535 aaPredicted RBP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 SARNPP82979 210 aaKnown RBP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 R3HDM1Q15032 1099 aaKnown RBP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 LRRC14Q15048 493 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 UBE2SQ16763 222 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 ATP8B4Q8TF62 1192 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 SEC14L1Q92503 715 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 TAOK3Q9H2K8 898 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 KCNK9Q9NPC2 374 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 GCNT4Q9P109 453 aa10.47□□□□□ -0.73
TUBB1-201ENST00000217133 PPP1R1BQ9UD71 204 aaPredicted RBP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
TUBB1-201ENST00000217133 A0A0A6YYK5 440 aaPredicted RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 DDX3XO00571 662 aaKnown RBP eCLIP10.46□□□□□ -0.736e-9■■■■□ 21.3
TUBB1-201ENST00000217133 ATP11AP98196 1134 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 DIXDC1Q155Q3 683 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 EDRF1Q3B7T1 1238 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 DUPD1Q68J44 220 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 CAPRIN2Q6IMN6 1127 aaKnown RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 GJB7Q6PEY0 223 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 BZW1Q7L1Q6 419 aaKnown RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 SLFN11Q7Z7L1 901 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 GLYCTKQ8IVS8 523 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 SLC35G2Q8TBE7 412 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 RBM46Q8TBY0 533 aaKnown RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 EPS8L3Q8TE67 593 aaKnown RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 HES6Q96HZ4 224 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 NLRP3Q96P20 1036 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 SEMA4AQ9H3S1 761 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 DBR1Q9UK59 544 aaKnown RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 AGAP1Q9UPQ3 857 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 USP15Q9Y4E8 981 aaPredicted RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 ESYT2A0FGR8 921 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 POTEB3A0JP26 581 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 USP17L5A8MUK1 530 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 POTECB2RU33 542 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 FGFR4P22455 802 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 CCND1P24385 295 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 ANXA13P27216 316 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 PRKCIP41743 596 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 CCNHP51946 323 aaPredicted RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 NUGGCQ68CJ6 796 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 POTEBQ6S5H4 581 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 FRMD5Q7Z6J6 570 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 ANKRD42Q8N9B4 389 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 RFFLQ8WZ73 363 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 PRCCQ92733 491 aaPredicted RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 SPATS2LQ9NUQ6 558 aaKnown RBP10.46□□□□□ -0.73
TUBB1-201ENST00000217133 PPP1R9AQ9ULJ8 1098 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 STXBP5LQ9Y2K9 1186 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
TUBB1-201ENST00000217133 MYH7BA7E2Y1 1941 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 TMEM110-MUSTN1A8MSY1 372 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.74
TUBB1-201ENST00000217133 ADRA2BP18089 450 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 DHX34Q14147 1143 aaKnown RBP10.46□□□□□ -0.74
TUBB1-201ENST00000217133 ZNF268Q14587 947 aaPredicted RBP10.46□□□□□ -0.74
TUBB1-201ENST00000217133 OTUD6AQ7L8S5 288 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 MTFR1LQ9H019 292 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 KCTD10Q9H3F6 313 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 GPCPD1Q9NPB8 672 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 FGFR1OP2Q9NVK5 253 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 INTUQ9ULD6 942 aa10.46□□□□□ -0.74
TUBB1-201ENST00000217133 DIS3Q9Y2L1 958 aaKnown RBP10.46□□□□□ -0.74
TUBB1-201ENST00000217133 TCP11X1B4DZS4 312 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 CALUO43852 315 aaPredicted RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 SNX3O60493 162 aa10.45□□□□□ -0.74
TUBB1-201ENST00000217133 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
TUBB1-201ENST00000217133 TM4SF1P30408 202 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms