RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 KBTBD12Q3ZCT8 623 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 CATIPQ7Z7H3 387 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 ECHDC2Q86YB7 292 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 NELFCDQ8IXH7 590 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 ARHGAP18Q8N392 663 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 IQCDQ96DY2 449 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 TOGARAM1Q9Y4F4 1720 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 PAX3P23760 479 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 ATP2C1P98194 919 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-201ENST00000216877 RIBC1Q8N443 379 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-201ENST00000216877 DCLRE1BQ9H816 532 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 CNNM1Q9NRU3 951 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 RASAL2Q9UJF2 1139 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 CCDC188H7C350 402 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 LIFRP42702 1097 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 CDK17Q00537 523 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 PLS1Q14651 629 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 SGMS1Q86VZ5 419 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 IFNL3Q8IZI9 196 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 MAGEB6Q8N7X4 407 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 HELBQ8NG08 1087 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-201ENST00000216877 UIMC1Q96RL1 719 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 NACAP1Q9BZK3 213 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 STK36Q9NRP7 1315 aa15.77■□□□□ 0.12
PTPRA-201ENST00000216877 SPAG7O75391 227 aa15.77■□□□□ 0.12
PTPRA-201ENST00000216877 AFPP02771 609 aaKnown RBP15.77■□□□□ 0.12
PTPRA-201ENST00000216877 CDR2Q01850 454 aa15.77■□□□□ 0.12
PTPRA-201ENST00000216877 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.12
PTPRA-201ENST00000216877 ANKRD27Q96NW4 1050 aa15.77■□□□□ 0.12
PTPRA-201ENST00000216877 ADAM7Q9H2U9 754 aa15.77■□□□□ 0.12
PTPRA-201ENST00000216877 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
PTPRA-201ENST00000216877 PHF24Q9UPV7 400 aa15.77■□□□□ 0.12
PTPRA-201ENST00000216877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 WDR91A4D1P6 747 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 UBAP1LF5GYI3 381 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 CERKLQ49MI3 558 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 RFWD3Q6PCD5 774 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 CCDC105Q8IYK2 499 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 CTNNBL1Q8WYA6 563 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 ARMCX3Q9UH62 379 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 COL16A1Q07092 1604 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 MAPK13O15264 365 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 SFSWAPQ12872 951 aaKnown RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 MAP7D1Q3KQU3 841 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 SLC44A4Q53GD3 710 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 IFIT1BQ5T764 474 aaKnown RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 APLFQ8IW19 511 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-201ENST00000216877 PDP2Q9P2J9 529 aa15.77■□□□□ 0.11
PTPRA-201ENST00000216877 A0A1W2PQJ5 194 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 SPATA31D3P0C874 917 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 PLCG1P19174 1290 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 USP11P51784 963 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 IL17AQ16552 155 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 CAPN12Q6ZSI9 719 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 SPATA31D4Q6ZUB0 917 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 EXOC3L1Q86VI1 746 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 SPATA24Q86W54 205 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 GIMAP8Q8ND71 665 aaPredicted RBP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 TSG101Q99816 390 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 SIKE1Q9BRV8 207 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 AMFRQ9UKV5 643 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 DCCP43146 1447 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 CFAP69A5D8W1 941 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 MARK3P27448 753 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 GALK1P51570 392 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 SEPT7Q16181 437 aaKnown RBP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 ALKBH5Q6P6C2 394 aaKnown RBP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 ATL2Q8NHH9 583 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 GPKOWQ92917 476 aaPredicted RBP eCLIP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 ZNF333Q96JL9 665 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 TAOK3Q9H2K8 898 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 CNNM2Q9H8M5 875 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 TDRKHQ9Y2W6 561 aaKnown RBP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 ABLIM1O14639 778 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 PJA2O43164 708 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 KPNB1Q14974 876 aaKnown RBP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 SLC18A3Q16572 532 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 ZCWPW2Q504Y3 356 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 CFAP61Q8NHU2 1237 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 SCFD2Q8WU76 684 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 PRPF31Q8WWY3 499 aaKnown RBP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
PTPRA-201ENST00000216877 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
PTPRA-201ENST00000216877 GFPT2O94808 682 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 GALNTL6Q49A17 601 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 DNAJC14Q6Y2X3 702 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-201ENST00000216877 LRRC74BQ6ZQY2 392 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 TTLL11Q8NHH1 800 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 WDR60Q8WVS4 1066 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 TMOD4Q9NZQ9 345 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 MYH7BA7E2Y1 1941 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 TNKSO95271 1327 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 INHBCP55103 352 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 RTP1P59025 263 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 CALCOCO2Q13137 446 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 CABP7Q86V35 215 aa15.75■□□□□ 0.11
PTPRA-201ENST00000216877 SMC1BQ8NDV3 1235 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms