RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 EHBP1Q8NDI1 1231 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 GTF3C2Q8WUA4 911 aaPredicted RBP19.05■□□□□ 0.64
VRK1-201ENST00000216639 TMEM174Q8WUU8 243 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 SH2D3AQ9BRG2 576 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 NLRC4Q9NPP4 1024 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 KCNG1Q9UIX4 513 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 PNMA3Q9UL41 463 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 REXO2Q9Y3B8 237 aaKnown RBP19.05■□□□□ 0.64
VRK1-201ENST00000216639 ZNF862O60290 1169 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 EXOC3O60645 756 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 PEX10O60683 326 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 ARHGAP25P42331 645 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 NEDD9Q14511 834 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 CYFIP1Q7L576 1253 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 CCDC60Q8IWA6 550 aaPredicted RBP19.05■□□□□ 0.64
VRK1-201ENST00000216639 C12orf56Q8IXR9 622 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 BORCS6Q96GS4 357 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 TSGA10Q9BZW7 698 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 SEPT9Q9UHD8 586 aaPredicted RBP19.05■□□□□ 0.64
VRK1-201ENST00000216639 ZNF215Q9UL58 517 aaPredicted RBP19.05■□□□□ 0.64
VRK1-201ENST00000216639 SSU72P8A0A1W2PR75 194 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 SOWAHBA6NEL2 793 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 AKR1B10O60218 316 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 TGFB3P10600 412 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 PRKCEQ02156 737 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 MOGSQ13724 837 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 TUBB2AQ13885 445 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 KCTD2Q14681 263 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 JAKMIP2Q96AA8 810 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 TUBB2BQ9BVA1 445 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 IRX2Q9BZI1 471 aaPredicted RBP19.04■□□□□ 0.64
VRK1-201ENST00000216639 MROH8Q9H579 483 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 ATP6V0A4Q9HBG4 840 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 GPRC5CQ9NQ84 441 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 ZNF302Q9NR11 478 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 ARHGAP20Q9P2F6 1191 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 RBPJLQ9UBG7 517 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 IGSF9BQ9UPX0 1349 aa19.04■□□□□ 0.64
VRK1-201ENST00000216639 A0A0U1RQJ8 604 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 CCDC169A6NNP5 214 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 SLC16A4O15374 487 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 STBD1O95210 358 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 ATG7O95352 703 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 SERPING1P05155 500 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 KRT13P13646 458 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 ABCD1P33897 745 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 KIF11P52732 1056 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 RTP1P59025 263 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 SP2Q02086 613 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 MAPK8IP2Q13387 824 aaPredicted RBP19.03■□□□□ 0.64
VRK1-201ENST00000216639 CCDC122Q5T0U0 273 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 MNS1Q8NEH6 495 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 SPIRE2Q8WWL2 714 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 ATRIPQ8WXE1 791 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 GANQ9H2C0 597 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 CYP26B1Q9NR63 512 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 FBXL5Q9UKA1 691 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 GUCA1BQ9UMX6 200 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 CTAGE9A4FU28 777 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 H0YCG3 227 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 FANCGO15287 622 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 PON1P27169 355 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 EIF4A3P38919 411 aaKnown RBP19.03■□□□□ 0.64
VRK1-201ENST00000216639 VAV2P52735 878 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 KIF5AQ12840 1032 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 TDRD12Q587J7 1177 aaKnown RBP19.03■□□□□ 0.64
VRK1-201ENST00000216639 GPAT2Q6NUI2 795 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 KCNV1Q6PIU1 500 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 MMP19Q99542 508 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 IKZF4Q9H2S9 585 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 KMT5AQ9NQR1 393 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 MYO6Q9UM54 1294 aa19.03■□□□□ 0.64
VRK1-201ENST00000216639 LCA5LO95447 670 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 SLC9A1P19634 815 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 UBA1P22314 1058 aaKnown RBP19.02■□□□□ 0.63
VRK1-201ENST00000216639 NPTX2P47972 431 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 FSTL1Q12841 308 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 RAPGEF1Q13905 1077 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 KLHDC7AQ5VTJ3 777 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 INTS8Q75QN2 995 aaKnown RBP19.02■□□□□ 0.63
VRK1-201ENST00000216639 MTERF4Q7Z6M4 381 aaKnown RBP19.02■□□□□ 0.63
VRK1-201ENST00000216639 SLC35F6Q8N357 371 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 TSC1Q92574 1164 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 IFT74Q96LB3 600 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 SPAG5Q96R06 1193 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 NTPCRQ9BSD7 190 aaKnown RBP19.02■□□□□ 0.63
VRK1-201ENST00000216639 TXNRD2Q9NNW7 524 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 LUC7LQ9NQ29 371 aaKnown RBP19.02■□□□□ 0.63
VRK1-201ENST00000216639 AIPL1Q9NZN9 384 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 GCNT4Q9P109 453 aa19.02■□□□□ 0.63
VRK1-201ENST00000216639 MAFBQ9Y5Q3 323 aaPredicted RBP19.02■□□□□ 0.63
VRK1-201ENST00000216639 SYNGAP1Q96PV0 1343 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 MAPK13O15264 365 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 SORBS3O60504 671 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 PLEKP08567 350 aaPredicted RBP19.01■□□□□ 0.63
VRK1-201ENST00000216639 UCHL3P15374 230 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 FMO5P49326 533 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 BFSP1Q12934 665 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 ASIC2Q16515 512 aa19.01■□□□□ 0.63
VRK1-201ENST00000216639 SHCBP1Q8NEM2 672 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms