RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CTAGE3PQ8IX95 158 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 PALM2Q8IXS6 379 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 RRN3P2A6NIE6 340 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
SIX4-201ENST00000216513 TRMT2AQ8IZ69 625 aaKnown RBP14.82□□□□□ -0.04
SIX4-201ENST00000216513 OXER1Q8TDS5 423 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
SIX4-201ENST00000216513 MFSD1Q9H3U5 465 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 RGL1Q9NZL6 768 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 NAA25Q14CX7 972 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 CYBBP04839 570 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 ADORA2AP29274 412 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 ATP1A2P50993 1020 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 VAV2P52735 878 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 SLC39A14Q15043 492 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 SMAD1Q15797 465 aaKnown RBP14.82□□□□□ -0.04
SIX4-201ENST00000216513 NDUFAF2Q8N183 169 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 TRIM7Q9C029 511 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 SPATC1LQ9H0A9 340 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 SLC4A7Q9Y6M7 1214 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 MESDQ14696 234 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 XKR3Q5GH77 459 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 P2RX5Q93086 422 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 STMN4Q9H169 189 aaPredicted RBP14.82□□□□□ -0.04
SIX4-201ENST00000216513 FBXL21Q9UKT6 434 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 ZC3H11AO75152 810 aaKnown RBP eCLIP14.81□□□□□ -0.04
SIX4-201ENST00000216513 HMBSP08397 361 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 NFKBIAP25963 317 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 NLRP11P59045 1033 aaKnown RBP14.81□□□□□ -0.04
SIX4-201ENST00000216513 ALX1Q15699 326 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 CALN1Q9BXU9 219 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 IFT122Q9HBG6 1241 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 MYO1FO00160 1098 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 PRPSAP2O60256 369 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 RALAP11233 206 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 C11orf57Q6ZUT1 292 aaPredicted RBP14.81□□□□□ -0.04
SIX4-201ENST00000216513 ZNF512Q96ME7 567 aaPredicted RBP14.81□□□□□ -0.04
SIX4-201ENST00000216513 ZNF560Q96MR9 790 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 P2RX7Q99572 595 aaKnown RBP14.81□□□□□ -0.04
SIX4-201ENST00000216513 SLC7A5P2Q9GIP4 190 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 SAMD15Q9P1V8 674 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 KIAA1468Q9P260 1216 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 PDHBP11177 359 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 SEPT6Q14141 434 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 LRRC31Q6UY01 552 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 CHMP6Q96FZ7 201 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 OPA1O60313 960 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 GFPT2O94808 682 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 ZNF286BP0CG31 522 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 PRKCEQ02156 737 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 SDE2Q6IQ49 451 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 FAM76AQ8TAV0 307 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 PRPF31Q8WWY3 499 aaKnown RBP14.81□□□□□ -0.04
SIX4-201ENST00000216513 SEC31AO94979 1220 aaKnown RBP14.81□□□□□ -0.04
SIX4-201ENST00000216513 CYP2C19P33261 490 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 ALDH1A3P47895 512 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 SBK1Q52WX2 424 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 PLA2G4FQ68DD2 849 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 CCDC110Q8TBZ0 833 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 SPON2Q9BUD6 331 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 VPS37BQ9H9H4 285 aa14.81□□□□□ -0.04
SIX4-201ENST00000216513 GOLGA8CPA6NN73 597 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 ACTN4O43707 911 aaKnown RBP14.8□□□□□ -0.04
SIX4-201ENST00000216513 HIP1RO75146 1068 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 TMC7Q7Z402 723 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 KCTD6Q8NC69 237 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 NGRNQ9NPE2 291 aaKnown RBP14.8□□□□□ -0.04
SIX4-201ENST00000216513 KCNK3O14649 394 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 PCDHB12Q9Y5F1 795 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 MAD1L1Q9Y6D9 718 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 PPATQ06203 517 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 MXD4Q14582 209 aaPredicted RBP14.8□□□□□ -0.04
SIX4-201ENST00000216513 DCAF4L1Q3SXM0 396 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 TIGD1Q96MW7 591 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 DEFB118Q96PH6 123 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 NSRP1Q9H0G5 558 aaKnown RBP14.8□□□□□ -0.04
SIX4-201ENST00000216513 HBP1O60381 514 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 PPP6R2O75170 966 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 ARHGAP15Q53QZ3 475 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 PASD1Q8IV76 773 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 SRBD1Q8N5C6 995 aaKnown RBP14.8□□□□□ -0.04
SIX4-201ENST00000216513 CLGNO14967 610 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 CDC27P30260 824 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 NME3Q13232 169 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 ERCC6LQ2NKX8 1250 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 ERICH1Q86X53 443 aa14.8□□□□□ -0.04
SIX4-201ENST00000216513 RBAKQ9NYW8 714 aaPredicted RBP14.8□□□□□ -0.04
SIX4-201ENST00000216513 GPR182O15218 404 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 EFNA5P52803 228 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 EPHA7Q15375 998 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 ALKBH8Q96BT7 664 aaKnown RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 TUBGCP2Q9BSJ2 902 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 MMTAG2Q9BU76 263 aaKnown RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 LSM7Q9UK45 103 aaKnown RBP14.79□□□□□ -0.04
SIX4-201ENST00000216513 MOCS3O95396 460 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 NPTXRO95502 500 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 AKR1A1P14550 325 aa14.79□□□□□ -0.04
SIX4-201ENST00000216513 USP11P51784 963 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms