RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 FDX1P10109 184 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 NMT1P30419 496 aaKnown RBP12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 DNM2P50570 870 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 ZNF131P52739 623 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 SP2Q02086 613 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 PDCLQ13371 301 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 VWA3BQ502W6 1294 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 NDST4Q9H3R1 872 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 ZNHIT6Q9NWK9 470 aaKnown RBP12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 HTTP42858 3142 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 KRT18P05783 430 aaKnown RBP12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 CXCR5P32302 372 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 MTIF2P46199 727 aaKnown RBP12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 CCDC181Q5TID7 509 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 SMARCAL1Q9NZC9 954 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 CAPN11Q9UMQ6 739 aa12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
GPATCH1-201ENST00000170564 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 CNMDO75829 334 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 TRIM21P19474 475 aaKnown RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 EPHX2P34913 555 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 GJA5P36382 358 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 TBC1D8BQ0IIM8 1120 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 PLS1Q14651 629 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 KAT2BQ92831 832 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 OLFML3Q9NRN5 406 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 MAGEC2Q9UBF1 373 aaPredicted RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 DUSP10Q9Y6W6 482 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 TRAF5O00463 557 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 KCNA2P16389 499 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 HNRNPH1P31943 449 aaKnown RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 FKBP3Q00688 224 aaKnown RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 CKAP4Q07065 602 aaKnown RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 BMT2Q1RMZ1 405 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 JPH2Q9BR39 696 aaPredicted RBP12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 YY1AP1Q9H869 796 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 TXNRD2Q9NNW7 524 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 SCN4AP35499 1836 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 KRT86O43790 486 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 DPY19L2P1Q6NXN4 242 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 SH2D3CQ8N5H7 860 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 SAMD3Q8N6K7 520 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 OR8K1Q8NGG5 319 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 NACC1Q96RE7 527 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 STRA6Q9BX79 667 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 HOXC10Q9NYD6 342 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 TRAF3IP3Q9Y228 551 aa12.34□□□□□ -0.43
GPATCH1-201ENST00000170564 USP8P40818 1118 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 CASP4P49662 377 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 MARSP56192 900 aaKnown RBP12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 KNOP1Q1ED39 458 aaKnown RBP12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 WDR93Q6P2C0 686 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 TRIM59Q8IWR1 403 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 COL4A3BPQ9Y5P4 624 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 ATP2C2O75185 946 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 STBD1O95210 358 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 RDXP35241 583 aaKnown RBP12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 RARRES1P49788 294 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 ACAD9Q9H845 621 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 CTDP1Q9Y5B0 961 aaPredicted RBP12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 MYPNQ86TC9 1320 aa12.33□□□□□ -0.44
GPATCH1-201ENST00000170564 MYO1FO00160 1098 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 PPP1R12BO60237 982 aaPredicted RBP12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 ZNF862O60290 1169 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 SORBS3O60504 671 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 AKAP3O75969 853 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 NOL4O94818 638 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 P4HBP07237 508 aaKnown RBP12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 MUTP22033 750 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 MAN2A1Q16706 1144 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 TRMT1LQ7Z2T5 733 aaKnown RBP12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 KCTD17Q8N5Z5 321 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 IFT81Q8WYA0 676 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 HAUS4Q9H6D7 363 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 PPP1R37O75864 691 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 HOXA7P31268 230 aaPredicted RBP12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 PPFIA1Q13136 1202 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 MEA1Q16626 185 aa12.32□□□□□ -0.44
GPATCH1-201ENST00000170564 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms