RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CALCAP01258 141 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 FGRP09769 529 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 MTMR3Q13615 1198 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 BYSLQ13895 437 aaKnown RBP18.14■□□□□ 0.49
CTDP1-201ENST00000075430 GALNT17Q6IS24 598 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 C6orf89Q6UWU4 347 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 KRT35Q92764 455 aa18.14■□□□□ 0.49
CTDP1-201ENST00000075430 NUP188Q5SRE5 1749 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 TOM1O60784 492 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 ANP32DO95626 131 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 ATP6V1G2O95670 118 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 CYP11B2P19099 503 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 SESN3P58005 492 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 BIRC3Q13489 604 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 GRAPQ13588 217 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 DRAP1Q14919 205 aaPredicted RBP18.13■□□□□ 0.49
CTDP1-201ENST00000075430 GRAPLQ8TC17 118 aaPredicted RBP18.13■□□□□ 0.49
CTDP1-201ENST00000075430 SCFD2Q8WU76 684 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 REEP2Q9BRK0 252 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 YIPF3Q9GZM5 350 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 SLIT2O94813 1529 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 SYCP3Q8IZU3 236 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 ZNF622Q969S3 477 aaKnown RBP eCLIP18.13■□□□□ 0.49
CTDP1-201ENST00000075430 NUCKS1Q9H1E3 243 aaKnown RBP18.13■□□□□ 0.49
CTDP1-201ENST00000075430 AGAP1Q9UPQ3 857 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 LRP6O75581 1613 aa18.13■□□□□ 0.49
CTDP1-201ENST00000075430 LMBR1Q8WVP7 490 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 C1orf54Q8WWF1 131 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 RNF25Q96BH1 459 aaPredicted RBP18.12■□□□□ 0.49
CTDP1-201ENST00000075430 DDX23Q9BUQ8 820 aaKnown RBP18.12■□□□□ 0.49
CTDP1-201ENST00000075430 GANQ9H2C0 597 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 DNAJC12Q9UKB3 198 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 BCL9LQ86UU0 1499 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 IGF2BP3O00425 579 aaKnown RBP eCLIP18.12■□□□□ 0.49
CTDP1-201ENST00000075430 SSTR3P32745 418 aaPredicted RBP18.12■□□□□ 0.49
CTDP1-201ENST00000075430 AGAP11Q8TF27 550 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 ASIC3Q9UHC3 531 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 PCDHA1Q9Y5I3 950 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 TCRBV7S2A1N4TA0A589 114 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 SPOPO43791 374 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 SERPINB2P05120 415 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 SBK1Q52WX2 424 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 HOOK3Q86VS8 718 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 ALG3Q92685 438 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 FAM84AQ96KN4 292 aa18.12■□□□□ 0.49
CTDP1-201ENST00000075430 FAM182AQ5T1J6 154 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 ZNF572Q7Z3I7 529 aaPredicted RBP18.11■□□□□ 0.49
CTDP1-201ENST00000075430 ZC3H12CQ9C0D7 883 aaKnown RBP18.11■□□□□ 0.49
CTDP1-201ENST00000075430 ECT2Q9H8V3 914 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 USP40Q9NVE5 1235 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 SWAP70Q9UH65 585 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 TOGARAM1Q9Y4F4 1720 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 RASGRF2O14827 1237 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 PIAS1O75925 651 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 NR3C1P04150 777 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 NT5DC3Q86UY8 548 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 JAMLQ86YT9 394 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 CUL5Q93034 780 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 HOOK2Q96ED9 719 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 DNM3Q9UQ16 869 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 MRPL12P52815 198 aaKnown RBP18.11■□□□□ 0.49
CTDP1-201ENST00000075430 MREGQ8N565 214 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 SLC20A1Q8WUM9 679 aa18.11■□□□□ 0.49
CTDP1-201ENST00000075430 TRIM6Q9C030 488 aaPredicted RBP18.11■□□□□ 0.49
CTDP1-201ENST00000075430 DISP2A7MBM2 1401 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 PDHA1P08559 390 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 DAB2IPQ5VWQ8 1189 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 ZNF449Q6P9G9 518 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 TRPM8Q7Z2W7 1104 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 CD302Q8IX05 232 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 CCT6BQ92526 530 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 IQCDQ96DY2 449 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 RUSC1Q9BVN2 902 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 NUP98P52948 1817 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 GH1P01241 217 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 YY1P25490 414 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 TNFRSF8P28908 595 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 PRUNE1Q86TP1 453 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 SPZ1Q9BXG8 430 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 RAB17Q9H0T7 212 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 DUOX1Q9NRD9 1551 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 TISP43B9A030 160 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 PPP1R11O60927 126 aaPredicted RBP18.1■□□□□ 0.49
CTDP1-201ENST00000075430 FAM13AO94988 1023 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 POLD1P28340 1107 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 DDR1Q08345 913 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 LRCH2Q5VUJ6 765 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 CYP4F22Q6NT55 531 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 BARGINQ6ZT62 677 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 DAGLBQ8NCG7 672 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 LRRC27Q9C0I9 530 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 JMJD4Q9H9V9 463 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 FAM114A2Q9NRY5 505 aa18.1■□□□□ 0.49
CTDP1-201ENST00000075430 ANKRD63C9JTQ0 380 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 EDIL3O43854 480 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 PSEN1P49768 467 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
CTDP1-201ENST00000075430 EPC2Q52LR7 807 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 PRR5LQ6MZQ0 368 aa18.09■□□□□ 0.49
CTDP1-201ENST00000075430 CATSPER3Q86XQ3 398 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms