RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MAPK7Q13164 816 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 PLS1Q14651 629 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 COG2Q14746 738 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 ANGEL2Q5VTE6 544 aaKnown RBP9.02□□□□□ -0.97
VAMP3-201ENST00000054666 SNRNP48Q6IEG0 339 aaKnown RBP9.02□□□□□ -0.97
VAMP3-201ENST00000054666 SLC9A9Q8IVB4 645 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 KSR1Q8IVT5 923 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 C4orf19Q8IY42 314 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 UBE2Q2Q8WVN8 375 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 BORCS6Q96GS4 357 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 C12orf42Q96LP6 360 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 OSBPL9Q96SU4 736 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 ACBD3Q9H3P7 528 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 ZNF112Q9UJU3 913 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 PPP2R3BQ9Y5P8 575 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 ATP8B3O60423 1300 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 ZNF541Q9H0D2 1346 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 MYH10P35580 1976 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 A0A087X0T9 212 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 ZNF185O15231 689 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 FAM228BP0C875 321 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 RFX1P22670 979 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 PTK2Q05397 1052 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 ITIH3Q06033 890 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 CETN1Q12798 172 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 NAB2Q15742 525 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 INTS8Q75QN2 995 aaKnown RBP9.01□□□□□ -0.97
VAMP3-201ENST00000054666 DAW1Q8N136 415 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 ZKSCAN4Q969J2 545 aaPredicted RBP9.01□□□□□ -0.97
VAMP3-201ENST00000054666 GPRASP2Q96D09 838 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 DMAC2Q9NW81 257 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 MAFGO15525 162 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 SASH3O75995 380 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 PLA2G4AP47712 749 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 JAM2P57087 298 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 SNRPFP62306 86 aaKnown RBP9.01□□□□□ -0.97
VAMP3-201ENST00000054666 C2orf54Q08AI8 447 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 BAATQ14032 418 aaPredicted RBP9.01□□□□□ -0.97
VAMP3-201ENST00000054666 XKR9Q5GH70 373 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 BEND6Q5SZJ8 279 aaPredicted RBP9.01□□□□□ -0.97
VAMP3-201ENST00000054666 ZNF746Q6NUN9 644 aaPredicted RBP9.01□□□□□ -0.97
VAMP3-201ENST00000054666 NFRKBQ6P4R8 1299 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 RUBCNQ92622 972 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 CDHR1Q96JP9 859 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 TEX13BQ9BXU2 312 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 FUT8Q9BYC5 575 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 ABCB6Q9NP58 842 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 SIX2Q9NPC8 291 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 ANKEF1Q9NU02 776 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 GGA3Q9NZ52 723 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 RNF14Q9UBS8 474 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 EXOC7Q9UPT5 735 aa9.01□□□□□ -0.97
VAMP3-201ENST00000054666 COL11A1P12107 1806 aaPredicted RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 A0A0U1RQG5 324 aaPredicted RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 BTNL10A8MVZ5 291 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 BACH1O14867 736 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 PALMO75781 387 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 GFPT2O94808 682 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 TRIM49P0CI25 452 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 TRIM49CP0CI26 452 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 KLRC1P26715 233 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 DSG3P32926 999 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 SMTNP53814 917 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 DMP1Q13316 513 aaPredicted RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 SMC1AQ14683 1233 aaKnown RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 GNPTABQ3T906 1256 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 FAM102BQ5T8I3 360 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 ALKBH5Q6P6C2 394 aaKnown RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 ZNF572Q7Z3I7 529 aaPredicted RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 ZNF571Q7Z3V5 609 aaPredicted RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 IRF2BP2Q7Z5L9 587 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 C12orf56Q8IXR9 622 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 RBM46Q8TBY0 533 aaKnown RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 NSUN6Q8TEA1 469 aaKnown RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 ATP6V0A1Q93050 837 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 PSMB7Q99436 277 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 STRA6Q9BX79 667 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 INTS2Q9H0H0 1204 aaKnown RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 IKZF4Q9H2S9 585 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 ACAD9Q9H845 621 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 SALL4Q9UJQ4 1053 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 PCDHGC5Q9Y5F6 944 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 F8VZ95 297 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 NCK2O43639 380 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 NR3C2P08235 984 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 OAS2P29728 719 aaKnown RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 SOX5P35711 763 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 PEX3P56589 373 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 UGCGQ16739 394 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 SUPT20HL1Q3ZLR7 823 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 CFAP221Q4G0U5 840 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 UTP14CQ5TAP6 766 aaKnown RBP9□□□□□ -0.97
VAMP3-201ENST00000054666 DPY19L2P1Q6NXN4 242 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 OTUD6AQ7L8S5 288 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 HAUS6Q7Z4H7 955 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 CREG2Q8IUH2 290 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 TRPM4Q8TD43 1214 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 COG1Q8WTW3 980 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 TAF4BQ92750 862 aa9□□□□□ -0.97
VAMP3-201ENST00000054666 VTI1AQ96AJ9 217 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms