RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 ZC3H3Q8IXZ2 948 aaKnown RBP14.32□□□□□ -0.12
CTNS-201ENST00000046640 PPM1EQ8WY54 764 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 CAMKK2Q96RR4 588 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 TEKT3Q9BXF9 490 aa14.32□□□□□ -0.12
CTNS-201ENST00000046640 EPHB4P54760 987 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 PPP2R5CQ13362 524 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 ARHGAP44Q17R89 818 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 CBWD6Q4V339 395 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 CBWD3Q5JTY5 395 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 CBWD5Q5RIA9 395 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 ZNF720Q7Z2F6 126 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 SYN2Q92777 582 aaPredicted RBP14.31□□□□□ -0.12
CTNS-201ENST00000046640 NACC1Q96RE7 527 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 TUFT1Q9NNX1 390 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 SEPT11Q9NVA2 429 aaKnown RBP14.31□□□□□ -0.12
CTNS-201ENST00000046640 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 RBAK-RBAKDNI3L0D1 243 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 GUCY1A3Q02108 690 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 NNTQ13423 1086 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 FBXW10Q5XX13 1052 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 ALKBH5Q6P6C2 394 aaKnown RBP14.31□□□□□ -0.12
CTNS-201ENST00000046640 MIER3Q7Z3K6 550 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 ZSWIM2Q8NEG5 633 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 SIX2Q9NPC8 291 aa14.31□□□□□ -0.12
CTNS-201ENST00000046640 GRID2IPA4D2P6 1211 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 OPA1O60313 960 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 PSMC2P35998 433 aaKnown RBP14.3□□□□□ -0.12
CTNS-201ENST00000046640 GTF2A1P52655 376 aaPredicted RBP14.3□□□□□ -0.12
CTNS-201ENST00000046640 CFAP221Q4G0U5 840 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 CFAP58Q5T655 872 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 U2AF1L4Q8WU68 220 aaKnown RBP14.3□□□□□ -0.12
CTNS-201ENST00000046640 ELMO3Q96BJ8 720 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 OLFML3Q9NRN5 406 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 ZNF536O15090 1300 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 NDUFAB1O14561 156 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 KCNK3O14649 394 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 EXOC3O60645 756 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 FLOT1O75955 427 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 HPDP32754 393 aaPredicted RBP14.3□□□□□ -0.12
CTNS-201ENST00000046640 HLTFQ14527 1009 aaKnown RBP eCLIP14.3□□□□□ -0.12
CTNS-201ENST00000046640 PADI6Q6TGC4 694 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 HS2ST1Q7LGA3 356 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 SAMD7Q7Z3H4 446 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 MAATS1Q7Z4T9 603 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 TADA2BQ86TJ2 420 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 FIZ1Q96SL8 496 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 MXRA8Q9BRK3 442 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 LUC7LQ9NQ29 371 aaKnown RBP14.3□□□□□ -0.12
CTNS-201ENST00000046640 GPRC5CQ9NQ84 441 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 NAGPAQ9UK23 515 aa14.3□□□□□ -0.12
CTNS-201ENST00000046640 K7ENM7 598 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 EIF3HO15372 352 aaKnown RBP eCLIP14.29□□□□□ -0.12
CTNS-201ENST00000046640 ASNSP08243 561 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 GAP43P17677 238 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 ABCB4P21439 1286 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 DLG4P78352 724 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 SP4Q02446 784 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 NSMFQ6X4W1 530 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 RNF10Q8N5U6 811 aaKnown RBP14.29□□□□□ -0.12
CTNS-201ENST00000046640 TAAR1Q96RJ0 339 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 METTL14Q9HCE5 456 aaKnown RBP14.29□□□□□ -0.12
CTNS-201ENST00000046640 MYOZ2Q9NPC6 264 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 AGPAT3Q9NRZ7 376 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 GOLGA8KD6RF30 607 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 ERLIN2O94905 339 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 HOXA7P31268 230 aaPredicted RBP14.29□□□□□ -0.12
CTNS-201ENST00000046640 ITGB3BPQ13352 177 aaPredicted RBP14.29□□□□□ -0.12
CTNS-201ENST00000046640 BMT2Q1RMZ1 405 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 GLYCTKQ8IVS8 523 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 DAW1Q8N136 415 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 WNK4Q96J92 1243 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
CTNS-201ENST00000046640 ZBTB7AO95365 584 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 POTEAQ6S8J7 498 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 FAM160B2Q86V87 743 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 DDX42Q86XP3 938 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTNS-201ENST00000046640 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTNS-201ENST00000046640 FRMD4BQ9Y2L6 1034 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 ZHX2Q9Y6X8 837 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 SLC26A4O43511 780 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 SHOX2O60902 331 aaPredicted RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 ATP9AO75110 1047 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 FMO5P49326 533 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 SEC24CP53992 1094 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 MRPS9P82933 396 aaKnown RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 MTMR2Q13614 643 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 IFT20Q8IY31 132 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 EFCAB13Q8IY85 973 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 PSMD1Q99460 953 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 AP1M1Q9BXS5 423 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 PLCB1Q9NQ66 1216 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 DNAJC12Q9UKB3 198 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 PCNTO95613 3336 aa14.28□□□□□ -0.12
CTNS-201ENST00000046640 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
CTNS-201ENST00000046640 GOLGA8IPA6NC78 632 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms