RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 HIP1RO75146 1068 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 VEGFAP15692 232 aaPredicted RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 CASP1P29466 404 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 RECQLP46063 649 aaPredicted RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 CXCL9Q07325 125 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 CDO1Q16878 200 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 CCDC13Q8IYE1 715 aa11.93□□□□□ -0.5
RGPD5-201ENST00000016946 PRMT6Q96LA8 375 aaPredicted RBP11.93□□□□□ -0.5
RGPD5-201ENST00000016946 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 SLC4A1P02730 911 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 PRKCBP05771 671 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 PDHBP11177 359 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 EPHX2P34913 555 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 MNAT1P51948 309 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 UHMK1Q8TAS1 419 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 DAAM1Q9Y4D1 1078 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 RARBP10826 455 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 CPB1P15086 417 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 PSMA2P25787 234 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 GPD1LQ8N335 351 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 GDAP1Q8TB36 358 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 CDC23Q9UJX2 597 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 MAGEB2O15479 319 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 CTSHP09668 335 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 CYP27A1Q02318 531 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 GUCY2DQ02846 1103 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 BZW1Q7L1Q6 419 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 SUCLA2Q9P2R7 463 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 AGO2Q9UKV8 859 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 PDS5AQ29RF7 1337 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 TRIM49BA6NDI0 452 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 ATP1A3P13637 1013 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 LLGL1Q15334 1064 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 SKIV2LQ15477 1246 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 GKAP1Q5VSY0 366 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 RNF219Q5W0B1 726 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 ERO1BQ86YB8 467 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 SAAL1Q96ER3 474 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 FAM114A2Q9NRY5 505 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 SPTLC3Q9NUV7 552 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 RGL1Q9NZL6 768 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 ZNF609O15014 1411 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 HGSO14964 777 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 S100BP04271 92 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 VAMP7P51809 220 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 ZNF131P52739 623 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 BASP1P80723 227 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 MAP7Q14244 749 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 RBAKQ9NYW8 714 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 STAP1Q9ULZ2 295 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 KIAA0391O15091 583 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 FTCDO95954 541 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 TROVE2P10155 538 aaKnown RBP eCLIP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 FCGRTP55899 365 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 RWDD4Q6NW29 188 aaKnown RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 XRRA1Q6P2D8 792 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 LRRC31Q6UY01 552 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 IGDCC4Q8TDY8 1250 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 PARD3BQ8TEW8 1205 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 ZKSCAN4Q969J2 545 aaPredicted RBP11.92□□□□□ -0.5
RGPD5-201ENST00000016946 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 RNF14Q9UBS8 474 aa11.92□□□□□ -0.5
RGPD5-201ENST00000016946 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 A8MXQ7 604 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 STK25O00506 426 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 PPARDQ03181 441 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 NAALADL2Q58DX5 795 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 PPP6R3Q5H9R7 873 aaPredicted RBP11.91□□□□□ -0.5
RGPD5-201ENST00000016946 B4GALNT4Q76KP1 1039 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 NDUFAF2Q8N183 169 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 MCUR1Q96AQ8 359 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 RILPQ96NA2 401 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 GBA2Q9HCG7 927 aaPredicted RBP11.91□□□□□ -0.5
RGPD5-201ENST00000016946 FNDC3AQ9Y2H6 1198 aaKnown RBP11.91□□□□□ -0.5
RGPD5-201ENST00000016946 MAFGO15525 162 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 CPP00450 1065 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 INHBAP08476 426 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 CAP2P40123 477 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 KCNH2Q12809 1159 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 CABS1Q96KC9 395 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 LBHD1Q9BQE6 289 aaPredicted RBP11.91□□□□□ -0.5
RGPD5-201ENST00000016946 CEP72Q9P209 647 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 STRIP2Q9ULQ0 834 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 IER5Q5VY09 327 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 ACRBPQ8NEB7 543 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 MGARPQ8TDB4 240 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 ZBED1O96006 694 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 MXD4Q14582 209 aaPredicted RBP11.91□□□□□ -0.5
RGPD5-201ENST00000016946 PRPF31Q8WWY3 499 aaKnown RBP11.91□□□□□ -0.5
RGPD5-201ENST00000016946 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
RGPD5-201ENST00000016946 NRBP1Q9UHY1 535 aa11.91□□□□□ -0.5
RGPD5-201ENST00000016946 NDUFA10O95299 355 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms