RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Slc6a16A0A1L1SR47 742 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Akap17bA2A3V1 959 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 MtrA6H5Y3 1253 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Apol7aB2RT54 418 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Ccdc152E9PX14 254 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 March10E9PX79 788 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 1700113H08RikE9Q9Q5 327 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Gm10134F6ZQC6 126 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Capn2O08529 700 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Efna5O08543 228 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Gp6P0C191 313 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Cd68P31996 326 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Rnf19aP50636 840 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Col9a2Q07643 688 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Nsun7Q14AW5 724 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Gas2l3Q3UWW6 683 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 DeptorQ570Y9 409 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Rbm34Q8C5L7 375 aaKnown RBP15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Gm5591Q8CDK1 855 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Ppp1r16bQ8VHQ3 568 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Clstn3Q99JH7 956 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Ppp1r3gQ9CW07 347 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Lrp2bpQ9D4C6 346 aa15.28■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Baz2bA2AUY4 2123 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 1700018F24RikB2RW27 314 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Cfap58B2RW38 873 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Vmn2r87E9PZX4 848 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Fmr1P35922 614 aaKnown RBP15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Ephb4P54761 987 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Fgfr4Q03142 799 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Lrrc55Q3UY51 311 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Sun3Q5SS91 320 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Msantd2Q6NZR2 559 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Rpap2Q8VC34 614 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 DutQ8VCG1 200 aaKnown RBP15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Hnrnpul1Q8VDM6 859 aaKnown RBP15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Grin3bQ91ZU9 1003 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Pls3Q99K51 630 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Brms1Q99N20 246 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Ddah1Q9CWS0 285 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Atp13a1Q9EPE9 1200 aaKnown RBP15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Mkrn2Q9ERV1 416 aaKnown RBP15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Zbtb22Q9Z0G7 638 aa15.27■□□□□ 0.04
Ercc1-203ENSMUST00000160369 Casp8ap2Q9WUF3 1962 aa15.27■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Cyp4a29A0A087WPC3 509 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Gucy2dA0A0U1RPR8 1117 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Igkv10-96A0A140T8M1 115 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Gm6133B2RY53 190 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Acad12D3Z7X0 555 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Zscan29E9Q5B4 869 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Gm8909G3UXE9 396 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 SprtnG3X912 497 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Apol10bG3X9K7 334 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 PtenO08586 403 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Exoc4O35382 975 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 EpoP07321 192 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 P4hbP09103 509 aaKnown RBP15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Gpr25P0C5I1 358 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Gfpt1P47856 697 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 NcanP55066 1268 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Mfhas1Q3V1N1 1048 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Xkr5Q5GH66 676 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Dusp11Q6NXK5 321 aaKnown RBP15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Smarca1Q6PGB8 1046 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Amer1Q7TS75 1132 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Clic6Q8BHB9 596 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Zfp202Q8C879 641 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Apol10aQ8CCA5 318 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Olfr390Q8VEZ7 311 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Acot11Q8VHQ9 594 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Slc12a9Q99MR3 914 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 TnmdQ9EP64 317 aa15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Wdr46Q9Z0H1 622 aaKnown RBP15.26■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Slc23a4A0A0J9YUX7 615 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Map7d2A2AG50 781 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 AurkbO70126 345 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Chrna1P04756 457 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Yap1P46938 488 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Dlg3P70175 849 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Ano7Q14AT5 859 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Pnpla5Q32LZ8 432 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Tmem109Q3UBX0 243 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Zbtb8osQ505B7 168 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Krt14Q61781 484 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 ChpfQ6IQX7 774 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Rrp12Q6P5B0 1295 aaKnown RBP15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Aggf1Q7TN31 711 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Cep120Q7TSG1 988 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Rexo1Q7TT28 1213 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Ehd2Q8BH64 543 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Zfp120Q8BZW4 436 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 ClmnQ8C5W0 1052 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Trim9Q8C7M3 817 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Agbl3Q8CDP0 1006 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 GhdcQ99J23 532 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Gm45861A0A1B0GRY3 1923 aa15.25■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Lrrc38A2VDH3 298 aa15.24■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Tmem240B2RWJ3 173 aa15.24■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Ace3D0G895 737 aa15.24■□□□□ 0.03
Ercc1-203ENSMUST00000160369 Rsph10bE9PYQ0 876 aa15.24■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms