RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Tlr5Q9JLF7 859 aa12.34□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Gm11983V9GXS8 105 aa12.34□□□□□ -0.43
Vamp1-202ENSMUST00000063588 Slc6a16A0A1L1SR47 742 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Cd70O55237 195 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Lrrc4bP0C192 709 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Slc3a2P10852 526 aaKnown RBP12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Otud5Q3U2S4 566 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Gm10392Q3V3I3 114 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Carmil2Q3V3V9 1296 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Trappc3lQ4KL14 181 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 MaeaQ4VC33 396 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Kiaa1211Q5PR69 1207 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Atp13a4Q5XF90 1193 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Fam214aQ69ZK7 1075 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Antxr2Q6DFX2 487 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Lrig3Q6P1C6 1117 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 3830417A13RikQ8BQJ2 303 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Azin2Q8BVM4 459 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Btbd7Q8CFE5 1130 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Dusp19Q8K4T5 220 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Znf445Q8R2V3 986 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 EpgnQ924X1 152 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Mxra8Q9DBV4 442 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Spock2Q9ER58 423 aa12.33□□□□□ -0.44
Vamp1-202ENSMUST00000063588 DohhA0A1Y7VJ29 135 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 1700018F24RikB2RW27 314 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Gimap9G3X987 291 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Cyth3O08967 399 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Tnfrsf11aO35305 625 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Axin2O88566 840 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Calb1P12658 261 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 PrkceP16054 737 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 MafbP54841 323 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Gjb6P70689 261 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Cct6aP80317 531 aaKnown RBP12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Tcp11Q01755 566 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Rufy4Q3TYX8 563 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Sec31aQ3UPL0 1230 aaKnown RBP12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Gm1587Q3UT80 123 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Ddx49Q4FZF3 480 aaKnown RBP12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Lrig2Q52KR2 1054 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Cd37Q61470 281 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Xpnpep1Q6P1B1 623 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Slc7a6osQ7TPE5 306 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Actn1Q7TPR4 892 aaKnown RBP12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 TbckQ8BM85 762 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Hsdl1Q8BTX9 330 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Ppme1Q8BVQ5 386 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Rassf4Q8CB96 322 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Il31raQ8K5B1 716 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Zcchc18Q8VD24 393 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Hspbp1Q99P31 357 aaKnown RBP12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Sar1bQ9CQC9 198 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Ergic2Q9CR89 377 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Fam114a1Q9D281 569 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Serpina9Q9D7D2 418 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Zkscan5Q9Z1D8 819 aa12.32□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Fndc3c1Q6DFV6 1356 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Calcoco2A2A6M5 331 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Arhgef10lA2AWP8 1280 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Heatr4E9Q357 955 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Zfp597E9Q6S0 419 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Pth1rP41593 591 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Actn4P57780 912 aaKnown RBP12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Klra9Q2TJJ8 266 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Cyp11b1Q3TG86 501 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Gm3414Q3TNU4 584 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Sh2d1b2Q45HK4 132 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Sh3gl1Q62419 368 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Trpv1Q704Y3 839 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Zbtb5Q7TQG0 670 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Tmem161bQ8C2L6 487 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Mrpl58Q8R035 206 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 IrgqQ8VIM9 583 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Vps36Q91XD6 386 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Q91Z58 1206 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Smc1bQ920F6 1248 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Traf7Q922B6 594 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Rilpl1Q9JJC6 406 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Atad5Q4QY64 1826 aa12.31□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Celf5D3Z4T1 395 aaKnown RBP12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Gad1P48318 593 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 LxnP70202 222 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Irf3P70671 419 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Tubb5P99024 444 aaKnown RBP12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Nhej1Q3KNJ2 295 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Znhit6Q3UFB2 460 aaKnown RBP12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Znf697Q569E7 569 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Krt15Q61414 452 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Adgre1Q61549 931 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 TxlnaQ6PAM1 554 aaKnown RBP12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Cyfip1Q7TMB8 1253 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Plppr4Q7TME0 766 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Sh3d21Q7TSG5 549 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Moxd2Q7TT41 619 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Dusp4Q8BFV3 398 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Olfml3Q8BK62 406 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Prl7b1Q8CGZ9 251 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Sash3Q8K352 380 aa12.3□□□□□ -0.44
Vamp1-202ENSMUST00000063588 Usp33Q8R5K2 909 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms