RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Rpn1Q91YQ5 608 aaKnown RBP9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Rwdd2aQ9D9S3 292 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Uso1Q9Z1Z0 959 aaKnown RBP9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Magea4F2Z493 315 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ppef1O35655 650 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ccnd2P30280 289 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Psmc4P54775 418 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Anks1aP59672 1150 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Lpar1P61793 364 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Kcnma1Q08460 1209 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm1587Q3UT80 123 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Samhd1Q60710 627 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Aoc2Q812C9 757 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 SucoQ8C341 1250 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 N4bp3Q8C7U1 537 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Plcb4Q91UZ1 1175 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Fam111aQ9D2L9 613 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Sdr42e1Q9D665 394 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ddx25Q9QY15 484 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Trip11E9Q512 1976 aa9.52□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cdr2lA2A6T1 465 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Prl6a1O35257 230 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Per1O35973 1291 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tpp1O89023 562 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Surf1P09925 306 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Trim43cP86449 446 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Evi5P97366 809 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ccdc85aQ5SP85 500 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 AlcamQ61490 583 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cyp3a11Q64459 504 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Nudt16Q6P3D0 195 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Hdac10Q6P3E7 666 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Acot5Q6Q2Z6 421 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Plppr4Q7TME0 766 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 RragaQ80X95 313 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 TbckQ8BM85 762 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ccdc169Q8BXX9 214 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Prpf31Q8CCF0 499 aaKnown RBP9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Brd3Q8K2F0 726 aaKnown RBP9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 BbxQ8VBW5 907 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 1700016D06RikQ9DAA5 166 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Prl2b1Q9DAZ2 228 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mettl7bQ9DD20 244 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm11985A0A1B0GS61 206 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm28042B7ZCM9 1014 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Nptx2O70340 429 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fgd3O88842 733 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Chp1P61022 195 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tmem35bQ3U0Y2 150 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Shc3Q61120 474 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gigyf2Q6Y7W8 1291 aaKnown RBP9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Calhm6Q8C9E8 313 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Olfr390Q8VEZ7 311 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 CbsQ91WT9 561 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tgs1Q923W1 853 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Med15Q924H2 789 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Hspbp1Q99P31 357 aaKnown RBP9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cfap53Q9D439 514 aa9.52□□□□□ -0.89
Trim39-201ENSMUST00000042717 RptorQ8K4Q0 1335 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 ErmardE9Q048 622 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm21973F6WEZ7 68 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm8909G3UXE9 396 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Wnt7bP28047 349 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mark2Q05512 776 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 E2f7Q6S7F2 904 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 NostrinQ6WKZ7 506 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 AsphQ8BSY0 741 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Lrrc56Q8K375 552 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 PrameQ9D4Z5 464 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ifi35Q9D8C4 286 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Sbno2Q7TNB8 1349 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Dnm2P39054 870 aaKnown RBP9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gtf2bP62915 316 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Dlg4Q62108 724 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Adam39Q7M762 756 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Haus4Q8BFT2 363 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Bmp3Q8BHE5 468 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Nim1kQ8BHI9 436 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Hdhd5Q91WM2 419 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Med10Q9CXU0 135 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Q9D2Q3 444 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Smco2Q9DA21 347 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Znf704Q9ERQ3 566 aa9.51□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm44511A0A0N4SW10 223 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Zfp408H7BX78 710 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Klrb1bP27812 223 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cdk4P30285 303 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Frat1P70339 274 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cntnap5bQ0V8T8 1292 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Spink5Q148R4 1017 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Rapgef1Q3UHC1 1224 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gm5169Q5M8P2 212 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cracr2bQ80ZJ8 394 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fam49aQ8BHZ0 323 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Smyd3Q9CWR2 428 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Snx29Q9D3S3 818 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Eef1gQ9D8N0 437 aaKnown RBP9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fam122aQ9DB52 284 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Eif4e3Q9DBB5 207 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cmtr1Q9DBC3 837 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms