RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Mageb16Q9CWV4 363 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Ifi202Q9R002 445 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Gys1Q9Z1E4 738 aaKnown RBP19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Fam171a1A2ATK9 892 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 FosP01101 380 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Tspyl3Q3UYP3 334 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Rassf2Q8BMS9 326 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 OtoaQ8K561 1137 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Nup58Q8R332 587 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Havcr2Q8VIM0 281 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 4930550L24RikQ99PA7 320 aa19.96■□□□□ 0.79
Ccdc3-201ENSMUST00000027988 Fbxw10Q5SUS0 1030 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Pim2Q62070 370 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Tas2r134Q7TQB0 298 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ints2Q80UK8 1198 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gpsm2Q8VDU0 679 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Slc12a6Q924N4 1150 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ubiad1Q9DC60 336 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 SmapQ9R0P4 181 aaKnown RBP19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Pkn1P70268 946 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Fbxo38Q8BMI0 1194 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Lmo3Q8BZL8 145 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Zhx2Q8C0C0 836 aaKnown RBP19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Vps52Q8C754 723 aaKnown RBP19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Fam228aQ8CDW1 299 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Znf704Q9ERQ3 566 aa19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Nup50Q9JIH2 466 aaKnown RBP19.95■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 4930544D05RikJ3QK56 214 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gcfc2Q8BKT3 769 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Appl2Q8K3G9 662 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gprc5cQ8K3J9 440 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 BlmhQ8R016 455 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Dnajc28Q8VCE1 385 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Q9DAQ4 598 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Edf1Q9JMG1 148 aaKnown RBP19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Fam205aA2APU8 1308 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ttc13A0A1L1SSC7 844 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Slc35g2D3YVE8 412 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ccdc78D3Z5T1 437 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ncf2O70145 525 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Slc16a2O70324 545 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Xrcc6P23475 608 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Lamc2Q61092 1191 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ddx31Q6NZQ2 687 aaKnown RBP19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 PaoxQ8C0L6 504 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 CalcbQ99MP3 130 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Lypla2Q9WTL7 231 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Cul1Q9WTX6 776 aa19.94■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Frmpd3A0A140LIW3 1774 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Atp2c2A7L9Z8 944 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Proca1B0QZF7 307 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Nova2D3YVV7 556 aaKnown RBP19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ttyh3Q6P5F7 524 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Med24Q99K74 987 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Hebp1Q9R257 190 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Eif3dO70194 548 aaKnown RBP19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ppp3caP63328 521 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Atp8a1P70704 1164 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Gas7Q60780 421 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Swap70Q6A028 585 aaKnown RBP19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Lrig3Q6P1C6 1117 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Rnaseh2bQ80ZV0 308 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Scfd2Q8BTY8 684 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Camkk2Q8C078 588 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Rapgef5Q8C0Q9 814 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ccdc134Q8C7V8 229 aa19.93■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ppp2r5cQ60996 524 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Adgrg6Q6F3F9 1165 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Rassf10Q8BL43 508 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Nemp2Q8CB65 421 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ccdc28aQ8CEI3 192 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Dennd1aQ8K382 1016 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Atp2a1Q8R429 994 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Reep2Q8VCD6 254 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Sf3a3Q9D554 501 aaKnown RBP19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Borcs6Q9D6W8 360 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Klf15Q9EPW2 415 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Actn2Q9JI91 894 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Cog1Q9Z160 980 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Btaf1E9QAE3 1848 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Tfe3Q64092 572 aaKnown RBP19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Fgd5Q80UZ0 1219 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 NrcamQ810U4 1256 aa19.92■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Rad51bO35719 350 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Mgat1P27808 447 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Tigd5Q499M4 642 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ttf2Q5NC05 1138 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ugt1a9Q62452 528 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ano5Q75UR0 904 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Ccdc25Q78PG9 208 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Pramef12Q9D2F1 463 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Prl2b1Q9DAZ2 228 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Cabp5Q9JLK3 173 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Skor2A7M7C7 1008 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 CnpP16330 420 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 MagohP61327 146 aaKnown RBP19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Sox13Q04891 613 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Rgs9bpQ148R9 237 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Slc10a5Q5PT54 434 aa19.91■□□□□ 0.78
Ccdc3-201ENSMUST00000027988 Insm1Q63ZV0 521 aa19.91■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms