RNA–Protein interactions for RNA: YKL136W

YKL136W, Transcript of Dubious open reading frame, yeast

Gene YKL136W, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL136W	YKL136W	RNH203	Q12338	110 aa		0.86	□□□□□ -2.27
YKL136W	YKL136W	PRP46	Q12417	451 aa	Predicted RBP	0.86	□□□□□ -2.27
YKL136W	YKL136W	OPI3	P05375	206 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	MET2	P08465	486 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	DAL81	P21657	970 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	TIP20	P33891	701 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	COS9	P36034	407 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	YKR032W	P36127	104 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	INM1	P38710	295 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	MNN5	P46982	586 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	SHE4	P51534	789 aa		0.85	□□□□□ -2.27
YKL136W	YKL136W	PGA3	Q12746	312 aa	Known RBP	0.85	□□□□□ -2.27
YKL136W	YKL136W	CDC21	P06785	304 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	KRE1	P17260	313 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	ERG3	P32353	365 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	ATM1	P40416	690 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	HSH155	P49955	971 aa	Known RBP	0.84	□□□□□ -2.27
YKL136W	YKL136W	SLT2	Q00772	484 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	YDL109C	Q12103	647 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	RUP1	Q12242	671 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	MED1	Q12321	566 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	MTR10	Q99189	972 aa		0.84	□□□□□ -2.27
YKL136W	YKL136W	TPK3	P05986	398 aa		0.83	□□□□□ -2.28
YKL136W	YKL136W	RPS14A	P06367	137 aa	Known RBP	0.83	□□□□□ -2.28
YKL136W	YKL136W	RPL23A	P0CX41	137 aa	Known RBP	0.83	□□□□□ -2.28
YKL136W	YKL136W	RPL23B	P0CX42	137 aa	Known RBP	0.83	□□□□□ -2.28
YKL136W	YKL136W	CLB3	P24870	427 aa		0.83	□□□□□ -2.28
YKL136W	YKL136W	RPB9	P27999	122 aa		0.83	□□□□□ -2.28
YKL136W	YKL136W	RPS14B	P39516	138 aa	Known RBP	0.83	□□□□□ -2.28
YKL136W	YKL136W	ROY1	Q04847	553 aa		0.83	□□□□□ -2.28
YKL136W	YKL136W	YDR222W	Q04925	415 aa		0.83	□□□□□ -2.28
YKL136W	YKL136W	GAT3	Q07928	141 aa		0.83	□□□□□ -2.28
YKL136W	YKL136W	YDR018C	Q12185	396 aa		0.83	□□□□□ -2.28
YKL136W	YKL136W	RPL12A	P0CX53	165 aa	Known RBP	0.82	□□□□□ -2.28
YKL136W	YKL136W	RPL12B	P0CX54	165 aa		0.82	□□□□□ -2.28
YKL136W	YKL136W	MIR1	P23641	311 aa	Known RBP	0.82	□□□□□ -2.28
YKL136W	YKL136W	SEC27	P41811	889 aa	Known RBP	0.82	□□□□□ -2.28
YKL136W	YKL136W	AIM23	P47015	356 aa		0.82	□□□□□ -2.28
YKL136W	YKL136W	YPL080C	Q02826	108 aa		0.82	□□□□□ -2.28
YKL136W	YKL136W	SCS7	Q03529	384 aa		0.82	□□□□□ -2.28
YKL136W	YKL136W	GMC1	Q04399	608 aa		0.82	□□□□□ -2.28
YKL136W	YKL136W	RLP24	Q07915	199 aa	Known RBP	0.82	□□□□□ -2.28
YKL136W	YKL136W	SER3	P40054	469 aa		0.81	□□□□□ -2.28
YKL136W	YKL136W	YER084W	P40057	128 aa		0.81	□□□□□ -2.28
YKL136W	YKL136W	ECM19	Q06011	112 aa		0.81	□□□□□ -2.28
YKL136W	YKL136W	RPL16A	P26784	199 aa	Known RBP	0.8	□□□□□ -2.28
YKL136W	YKL136W	OLA1	P38219	394 aa	Known RBP	0.8	□□□□□ -2.28
YKL136W	YKL136W	ASP1	P38986	381 aa	Predicted RBP	0.8	□□□□□ -2.28
YKL136W	YKL136W	PRP3	Q03338	469 aa	Predicted RBP	0.8	□□□□□ -2.28
YKL136W	YKL136W	GAS2	Q06135	555 aa		0.8	□□□□□ -2.28
YKL136W	YKL136W	YCR051W	P25631	222 aa		0.79	□□□□□ -2.28
YKL136W	YKL136W	MRPL19	P53875	158 aa		0.79	□□□□□ -2.28
YKL136W	YKL136W	YMR010W	Q03687	405 aa		0.79	□□□□□ -2.28
YKL136W	YKL136W	DXO1	Q06349	442 aa		0.79	□□□□□ -2.28
YKL136W	YKL136W	ARF1	P11076	181 aa	Known RBP	0.78	□□□□□ -2.28
YKL136W	YKL136W	MRP7	P12687	371 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	BGL2	P15703	313 aa	Known RBP	0.78	□□□□□ -2.28
YKL136W	YKL136W	HSP104	P31539	908 aa	Known RBP	0.78	□□□□□ -2.28
YKL136W	YKL136W	DOA1	P36037	715 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	ZTA1	P38230	334 aa	Known RBP	0.78	□□□□□ -2.28
YKL136W	YKL136W	SLM4	P38247	162 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	ASG7	P46993	209 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	EFM3	P47163	339 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	BNI5	P53890	448 aa	Known RBP	0.78	□□□□□ -2.28
YKL136W	YKL136W	URC2	Q04411	772 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	YDR341C	Q05506	607 aa	Known RBP	0.78	□□□□□ -2.28
YKL136W	YKL136W	MMT2	Q08970	484 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	YPL264C	Q08980	353 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	MED2	Q12124	431 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	YPR063C	Q12160	140 aa		0.78	□□□□□ -2.28
YKL136W	YKL136W	ADH3	P07246	375 aa	Known RBP	0.77	□□□□□ -2.29
YKL136W	YKL136W	SLM5	P25345	492 aa	Known RBP	0.77	□□□□□ -2.29
YKL136W	YKL136W	QDR3	P38227	689 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	TAE1	P38340	232 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	YCH1	P42937	148 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	RTS3	P53289	263 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	TAF11	Q04226	346 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	UTP15	Q04305	513 aa	Known RBP	0.77	□□□□□ -2.29
YKL136W	YKL136W	DIB1	Q06819	143 aa	Predicted RBP	0.77	□□□□□ -2.29
YKL136W	YKL136W	SLM3	Q12093	417 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	AFI1	Q99222	893 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	YRF1-4	O13559	1382 aa		0.77	□□□□□ -2.29
YKL136W	YKL136W	RED1	P14291	827 aa		0.76	□□□□□ -2.29
YKL136W	YKL136W	RIM1	P32445	135 aa	Known RBP	0.76	□□□□□ -2.29
YKL136W	YKL136W	RRG9	P40156	214 aa		0.76	□□□□□ -2.29
YKL136W	YKL136W	YMR244W	Q04018	355 aa		0.76	□□□□□ -2.29
YKL136W	YKL136W	NSE1	Q07913	336 aa		0.76	□□□□□ -2.29
YKL136W	YKL136W	DFM1	Q12743	341 aa	Known RBP	0.76	□□□□□ -2.29
YKL136W	YKL136W	RSA4	P25382	515 aa	Known RBP	0.75	□□□□□ -2.29
YKL136W	YKL136W	ERV1	P27882	189 aa		0.75	□□□□□ -2.29
YKL136W	YKL136W	SSE1	P32589	693 aa	Known RBP	0.75	□□□□□ -2.29
YKL136W	YKL136W	YFR045W	P43617	309 aa		0.75	□□□□□ -2.29
YKL136W	YKL136W	CWC22	P53333	577 aa	Known RBP	0.75	□□□□□ -2.29
YKL136W	YKL136W	YLH47	Q06493	454 aa		0.75	□□□□□ -2.29
YKL136W	YKL136W	ARR1	Q06596	294 aa		0.75	□□□□□ -2.29
YKL136W	YKL136W	SGT2	Q12118	346 aa	Known RBP	0.75	□□□□□ -2.29
YKL136W	YKL136W	RNA1	P11745	407 aa	Known RBP	0.74	□□□□□ -2.29
YKL136W	YKL136W	URA7	P28274	579 aa	Known RBP	0.74	□□□□□ -2.29
YKL136W	YKL136W	ARO4	P32449	370 aa	Known RBP	0.74	□□□□□ -2.29
YKL136W	YKL136W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.74	□□□□□ -2.29	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms